Authors
Erin Shammel Baker, Eric A Livesay, Daniel J Orton, Ronald J Moore, William F Danielson III, David C Prior, Yehia M Ibrahim, Brian L LaMarche, Anoop M Mayampurath, Athena A Schepmoes, Derek F Hopkins, Keqi Tang, Richard D Smith, Mikhail E Belov
Publication date
2010/2/5
Journal
Journal of proteome research
Volume
9
Issue
2
Pages
997-1006
Publisher
American Chemical Society
Description
A high-throughput approach and platform using 15 min reversed-phase capillary liquid chromatography (RPLC) separations in conjunction with ion mobility spectrometry-mass spectrometry (IMS-MS) measurements was evaluated for the rapid analysis of complex proteomics samples. To test the separation quality of the short LC gradient, a sample was prepared by spiking 20 reference peptides at varying concentrations from 1 ng/mL to 10 μg/mL into a tryptic digest of mouse blood plasma and analyzed with both a LC-Linear Ion Trap Fourier Transform (FT) MS and LC-IMS-TOF MS. The LC-FT MS detected 13 out of the 20 spiked peptides that had concentrations ≥100 ng/mL. In contrast, the drift time selected mass spectra from the LC-IMS-TOF MS analyses yielded identifications for 19 of the 20 peptides with all spiking levels present. The greater dynamic range of the LC-IMS-TOF MS system could be attributed to …
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