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Smallholder farms in sub-Saharan African exhibit substantial heterogeneity in soil fertility, and nutrient resource allocation strategies that address this variability are required to increase nutrient use efficiencies. We applied the Field-scale resource Interactions, use Efficiencies and Long-term soil fertility Development (FIELD) model to explore consequences of various manure and fertilizer application strategies on crop productivity and soil organic carbon (SOC) dynamics on farms varying in resource endowment in a case study village in Murewa District, Zimbabwe. FIELD simulated a rapid decline in SOC and maize yields when native woodlands were cleared for maize cultivation without fertilizer inputs coupled with removal of crop residues. Applications of 10 t manure ha⁻¹ year⁻¹ for 10 years were required to restore maize productivity to the yields attainable under native woodland. Long-term application …