Authors
Juan A Vizcaíno, Eric W Deutsch, Rui Wang, Attila Csordas, Florian Reisinger, Daniel Ríos, José A Dianes, Zhi Sun, Terry Farrah, Nuno Bandeira, Pierre-Alain Binz, Ioannis Xenarios, Martin Eisenacher, Gerhard Mayer, Laurent Gatto, Alex Campos, Robert J Chalkley, Hans-Joachim Kraus, Juan Pablo Albar, Salvador Martinez-Bartolome, Rolf Apweiler, Gilbert S Omenn, Lennart Martens, Andrew R Jones, Henning Hermjakob
Publication date
2014/3
Journal
Nature biotechnology
Volume
32
Issue
3
Pages
223-226
Publisher
Nature Publishing Group US
Description
Individual resources can join ProteomeXchange by implementing the ProteomeXchange data submission and dissemination guidelines, and metadata requirements. In the current version (http://www. proteomexchange. org/concept), the mandatory information includes the following: first, mass spectrometer output files (raw data, either in a binary format, or in a standard open format such as mzML); second, processed identification results (two submission modes are available, see below); and third, sufficient metadata to provide a suitable biological and technological background, including method information such as transition lists in the case of SRM data. Other types of information, such as peak list files (processed versions of mass spectra most often used in the identification process) and quantification results can also be provided.
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Scholar articles