Authors
Corinna Kolářik, Martin Hofmann-Apitius, Marc Zimmermann, Juliane Fluck
Publication date
2007/7
Journal
Bioinformatics
Volume
23
Issue
13
Pages
i264-i272
Publisher
Oxford University Press
Description
Knowledge about biological effects of small molecules helps in the understanding of biological processes and supports the development of new therapeutic agents. DrugBank is a high quality database providing such information about drugs that contains annotation of drug effects and classification of therapeutic effects. However, to broaden the scope of such a database in classifying and annotating drugs, systems for automatic extraction of classification terms and the corresponding annotation of drugs are needed. We have developed an approach for the identification of new terms used in unstructured text that provide information about drug properties. It is based on the identification and extraction of phrases corresponding to lexico-syntactic patterns - so-called Hearst patterns that contain drug names and directly related drug annotation terms. Such phrases could be identified with a high performance in …
Total citations
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Scholar articles
C Kolářik, M Hofmann-Apitius, M Zimmermann, J Fluck - Bioinformatics, 2007