Authors
Jakaria Shawon, Lisa G Pell, Mamun Kabir, Kara Evans, Mehedi Hasan, Grace Li, Huma Qamar, Cody WE Starke, Shakya Kurukulasuriya, Abdullah Al Mahmud, Philip M Sherman, Shafiqul Alam Sarker, Daniel E Roth, Rashidul Haque
Publication date
2024/1/11
Journal
Microbiology Spectrum
Volume
12
Issue
1
Pages
e02711-23
Publisher
American Society for Microbiology
Description
Lactiplantibacillus plantarum ATCC 202195 has probiotic properties that may be beneficial in early infancy. Since the effects of probiotics are often strain and dose specific, tools are needed to identify and enumerate L. plantarum ATCC 202195 with high sensitivity and specificity. Herein, a probe-based real-time quantitative PCR (qPCR) assay was developed to detect and enumerate L. plantarum ATCC 202195. The probe sequence contained a single nucleotide polymorphism within gene FEE41_08190 that was unique to L. plantarum ATCC 202195 at the time of the assay’s design. The linear dynamic range of the assay spanned five orders of magnitude with an R 2 that did not deviate from linearity and an amplification efficiency that ranged from 97% to 110% across six independent plates. At 95% confidence, the limit of detection in the assay was estimated at roughly 15 cells. No amplification was observed for …
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