Authors
Geoffrey P Morris, Punna Ramu, Santosh P Deshpande, C Thomas Hash, Trushar Shah, Hari D Upadhyaya, Oscar Riera-Lizarazu, Patrick J Brown, Charlotte B Acharya, Sharon E Mitchell, James Harriman, Jeffrey C Glaubitz, Edward S Buckler, Stephen Kresovich
Publication date
2013/1/8
Journal
Proceedings of the National Academy of Sciences
Volume
110
Issue
2
Pages
453-458
Publisher
National Academy of Sciences
Description
Accelerating crop improvement in sorghum, a staple food for people in semiarid regions across the developing world, is key to ensuring global food security in the context of climate change. To facilitate gene discovery and molecular breeding in sorghum, we have characterized ∼265,000 single nucleotide polymorphisms (SNPs) in 971 worldwide accessions that have adapted to diverse agroclimatic conditions. Using this genome-wide SNP map, we have characterized population structure with respect to geographic origin and morphological type and identified patterns of ancient crop diffusion to diverse agroclimatic regions across Africa and Asia. To better understand the genomic patterns of diversification in sorghum, we quantified variation in nucleotide diversity, linkage disequilibrium, and recombination rates across the genome. Analyzing nucleotide diversity in landraces, we find evidence of selective sweeps …
Total citations
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Scholar articles
GP Morris, P Ramu, SP Deshpande, CT Hash, T Shah… - Proceedings of the National Academy of Sciences, 2013