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The separation of the base flow component from a varying streamflow hydrograph is called “hydrograph analysis.” In this study, two digital filter based separation modules, the BFLOW and Eckhardt filters, were incorporated into the Web based Hydrograph Analysis Tool (WHAT) system. A statistical component was also developed to provide fundamental information for flow frequency analysis and time series analysis. The Web Geographic Information System (GIS) version of the WHAT system accesses and uses U.S. Geological Survey (USGS) daily streamflow data from the USGS web server. The results from the Eckhardt filter method were compared with the results from the BFLOW filter method that was previously validated, since measured base flow data were not available for this study. Following validation, the two digital filter methods in the WHAT system were run for 50 Indiana gaging stations. The Nash …