Authors
Erin Ostrem Loss, Jaron Thompson, Pak Lun Kevin Cheung, Yili Qian, Ophelia S Venturelli
Publication date
2023/1
Journal
Nature ecology & evolution
Volume
7
Issue
1
Pages
127-142
Publisher
Nature Publishing Group UK
Description
Dietary fibre impacts the growth dynamics of human gut microbiota, yet we lack a detailed and quantitative understanding of how these nutrients shape microbial interaction networks and responses to perturbations. By building human gut communities coupled with computational modelling, we dissect the effects of fibres that vary in chemical complexity and each of their constituent sugars on community assembly and response to perturbations. We demonstrate that the degree of chemical complexity across different fibres limits microbial growth and the number of species that can utilize these nutrients. The prevalence of negative interspecies interactions is reduced in the presence of fibres compared with their constituent sugars. Carbohydrate chemical complexity enhances the reproducibility of community assembly and resistance of the community to invasion. We demonstrate that maximizing or minimizing …
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