Authors
Ethan T Hillman, Ariangela J Kozik, Casey A Hooker, John L Burnett, Yoojung Heo, Violet A Kiesel, Clayton J Nevins, Jordan MKI Oshiro, Melissa M Robins, Riya D Thakkar, Sophie Tongyu Wu, Stephen R Lindemann
Publication date
2020/7
Journal
Microbial genomics
Volume
6
Issue
7
Pages
e000399
Publisher
Microbiology Society
Description
Roseburia species are important denizens of the human gut microbiome that ferment complex polysaccharides to butyrate as a terminal fermentation product, which influences human physiology and serves as an energy source for colonocytes. Previous comparative genomics analyses of the genus Roseburia have examined polysaccharide degradation genes. Here, we characterize the core and pangenomes of the genus Roseburia with respect to central carbon and energy metabolism, as well as biosynthesis of amino acids and B vitamins using orthology-based methods, uncovering significant differences among species in their biosynthetic capacities. Variation in gene content among Roseburia species and strains was most significant for cofactor biosynthesis. Unlike all other species of Roseburia that we analysed, Roseburia inulinivorans strains lacked biosynthetic genes for riboflavin or …
Total citations
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