Authors
Luděk Berec, Tomáš Diviák, Aleš Kuběna, René Levínský, Roman Neruda, Gabriela Suchopárová, Josef Šlerka, Martin Šmíd, Jan Trnka, Vít Tuček, Petra Vidnerová, Milan Zajíček, František Zapletal
Publication date
2021/5/18
Journal
MedRxiv
Pages
2021.05. 13.21257139
Publisher
Cold Spring Harbor Laboratory Press
Description
This report presents a technical description of our agent-based epidemic model of a particular middle-sized municipality. We have developed a realistic model with 56 thousand inhabitants and 2.7 millions of social contacts. These form a multi-layer social network that serves as a base of our epidemic simulation. The disease is modeled by our extended SEIR model with parameters fitted to real epidemics data for Czech Republic. The model is able to simulate a whole range of non-pharmaceutical interventions on individual level, such as protective measures and physical distancing, testing, contact tracing, isolation and quarantine. The effect of government-issued measures such as contact restrictions in different environments (schools, restaurants, vendors, etc.) can also be simulated.
The model is implemented in Python and is available as open source at: www.github.com/epicity-cz/model-m/releases
Total citations
202120222023312
Scholar articles
L Berec, T Diviák, A Kuběna, R Levínský, R Neruda… - MedRxiv, 2021