Authors
Miren Iturriza-Gómara, Jon Green, David WG Brown, Ulrich Desselberger, James J Gray
Publication date
2000/2/1
Journal
Journal of Clinical Microbiology
Volume
38
Issue
2
Pages
898-901
Publisher
American Society for Microbiology
Description
A degenerate version (1T1-D) of the rotavirus P[8]-specific primer (1T-1) allowed strains previously untypeable due to the accumulation of point mutations at the primer binding site to be P typed by reverse transcription-PCR. Sequencing of the cDNA followed by sequence alignment and phylogenetic analysis identified lineages and sublineages within the rotavirus P[8] types, while the use of 1T-1 or 1T-1D primers did not yield viral clusters in any particular lineage.
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