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Floris J. van Eerden
Floris J. van Eerden
Bestätigte E-Mail-Adresse bei ifrec.osaka-u.ac.jp
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Zitiert von
Zitiert von
Jahr
Lipid organization of the plasma membrane
HI Ingólfsson, MN Melo, FJ Van Eerden, C Arnarez, CA Lopez, ...
Journal of the american chemical society 136 (41), 14554-14559, 2014
9122014
Martini force field parameters for glycolipids
CA López, Z Sovova, FJ van Eerden, AH de Vries, SJ Marrink
Journal of chemical theory and computation 9 (3), 1694-1708, 2013
2082013
Characterization of thylakoid lipid membranes from cyanobacteria and higher plants by molecular dynamics simulations
FJ van Eerden, DH de Jong, AH de Vries, TA Wassenaar, SJ Marrink
Biochimica et Biophysica Acta (BBA)-Biomembranes 1848 (6), 1319-1330, 2015
1532015
Exchange pathways of plastoquinone and plastoquinol in the photosystem II complex
FJ Van Eerden, MN Melo, PWJM Frederix, X Periole, SJ Marrink
Nature communications 8 (1), 15214, 2017
932017
Design and properties of genetically encoded probes for sensing macromolecular crowding
B Liu, C Åberg, FJ van Eerden, SJ Marrink, B Poolman, AJ Boersma
Biophysical journal 112 (9), 1929-1939, 2017
722017
Molecular dynamics of photosystem II embedded in the thylakoid membrane
FJ Van Eerden, T Van Den Berg, PWJM Frederix, DH De Jong, X Periole, ...
The Journal of Physical Chemistry B 121 (15), 3237-3249, 2017
482017
Flexible, functional, and familiar: characteristics of SARS-CoV-2 spike protein evolution
DS Saputri, S Li, FJ Van Eerden, J Rozewicki, Z Xu, HS Ismanto, A Davila, ...
Frontiers in microbiology 11, 2112, 2020
432020
Prediction of thylakoid lipid binding sites on photosystem II
FJ Van Eerden, MN Melo, PWJM Frederix, SJ Marrink
Biophysical journal 113 (12), 2669-2681, 2017
432017
Understanding conformational dynamics of complex lipid mixtures relevant to biology
R Friedman, S Khalid, C Aponte-Santamaría, E Arutyunova, M Becker, ...
The Journal of membrane biology 251, 609-631, 2018
382018
Methods for sequence and structural analysis of B and T cell receptor repertoires
S Teraguchi, DS Saputri, MA Llamas-Covarrubias, A Davila, D Diez, ...
Computational and Structural Biotechnology Journal 18, 2000-2011, 2020
302020
Celastrol suppresses humoral immune responses and autoimmunity by targeting the COMMD3/8 complex
T Shirai, A Nakai, E Ando, J Fujimoto, S Leach, T Arimori, D Higo, ...
Science Immunology 8 (81), eadc9324, 2023
142023
Structural modeling of lymphocyte receptors and their antigens
S Li, J Wilamowski, S Teraguchi, FJ van Eerden, J Rozewicki, A Davila, ...
In Vitro Differentiation of T-Cells: Methods and Protocols, 207-229, 2019
142019
Enhancement of SARS-CoV-2 Infection via Crosslinking of Adjacent Spike Proteins by N-Terminal Domain-Targeting Antibodies
T Lusiany, T Terada, J Kishikawa, M Hirose, DV Chen, F Sugihara, ...
Viruses 15 (12), 2421, 2023
32023
TCR-pMHC complex formation triggers CD3 dynamics
FJ van Eerden, AA Sherif, MA Llamas-Covarrubias, A Millius, X Lu, ...
eLife 12, 2023
32023
Differential Scanning Calorimetry and Protein Stability
FJ van Eerden
Faculty of Science and Engineering, 2009
12009
Fc-independent SARS-CoV-2 infection-enhancing antibodies decouple N-terminal and receptor-binding domains by cross-linking neighboring spikes
FJ van Eerden, S Li, T Lusiany, HS Ismanto, T Terada, C Gerle, ...
bioRxiv, 2024.08. 21.608921, 2024
2024
When the TCR's engaged, the CD3 epsilons will play: A dynamic T cell receptor (TCR) triggering mechanism
FJ van Eerden, AA Sherif, MA Llamas-Covarrubias, DM Standley
Biophysical Journal 122 (3), 187a, 2023
2023
TCR binding to peptide-MHC complex acts as a drawbridge for CD3 cross-membrane signaling
FJ van Eerden, AA Sherif, MA Llamas-Covarrubias, DM Standley
bioRxiv, 2022.07. 27.501668, 2022
2022
Photosynthesis in silico: Simulations of Photosystem II and the Thylakoid Membrane
FJ van Eerden
2016
Simulation of Photosystem Ii Dynamics in the Thylakoid Membrane
FJ van Eerden, DH de Jong, X Periole, SJ Marrink
Biophysical Journal 106 (2), 181a, 2014
2014
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