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Michael Gribskov
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Year
Comparative genomics of the extremophileCryomyces antarcticusand other psychrophilic Dothideomycetes
SV Gomez, W Sic, S Haridas, K LaButti, J Eichenberger, N Kaur, A Lipzen, ...
2024
Genome Sequence of the Cacao Pathogen Moniliophthora roreri Belonging to the Invasive A1B1 Mating Type: A Resource for Genomic Efforts in Cacao Pathology
JR Díaz-Valderrama, KB Rubio-Rojas, NB Fernández, T Kijpornyongpan, ...
PhytoFrontiers™ 3 (3), 719-722, 2023
2023
Mechanisms of infection and response of the fungal wheat pathogen Zymoseptoria tritici during compatible, incompatible and non-host interactions
SV Gomez-Gutierrez, CR Million, N Jaiswal, M Gribskov, M Helm, ...
bioRxiv, 2023.11. 20.567875, 2023
2023
Comparative secretome analysis of Zymoseptoria tritici isolates to identify conserved secreted effector proteins
SV Gomez, M Gribskov, SB Goodwin
PHYTOPATHOLOGY 112 (11), 152-152, 2022
2022
Bibliometric review of ATAC-Seq and its application in gene expression
L Luo, M Gribskov, S Wang
Briefings in Bioinformatics 23 (3), bbac061, 2022
342022
Shiny-DEG: a web application to analyze and visualize differentially expressed genes in RNA-seq
S Wang, Y Zhang, C Hu, N Zhang, M Gribskov, H Yang
Interdisciplinary Sciences: Computational Life Sciences 12, 349-354, 2020
52020
miRNA‐mediated macrophage behaviors responding to matrix stiffness and ox‐LDL
J Li, S Wang, Y Li, N Zhang, M Gribskov, X Zhang, M Lin, D Shao, ...
Journal of Cellular Physiology 235 (9), 6139-6153, 2020
172020
The evolution history of Fe–S cluster A-type assembly protein reveals multiple gene duplication events and essential protein motifs
HM Lu, JD Li, YD Zhang, XL Lu, C Xu, Y Huang, M Gribskov
Genome Biology and Evolution 12 (3), 160-173, 2020
62020
Chromatin-enriched RNAs mark active and repressive cis-regulation: An analysis of nuclear RNA-seq
X Sun, Z Wang, JM Hall, C Perez-Cervantes, AJ Ruthenburg, ...
PLoS computational biology 16 (2), e1007119, 2020
72020
MiPepid: MicroPeptide identification tool using machine learning
M Zhu, M Gribskov
BMC bioinformatics 20, 1-11, 2019
802019
IRESpy: an XGBoost model for prediction of internal ribosome entry sites
J Wang, M Gribskov
BMC bioinformatics 20 (1), 1-15, 2019
682019
Rothamsted Repository Download
M Urban, A Cuzick, J Seager, V Wood, K Rutherford, N De Silva, ...
Nucleic Acids Research, 1, 2019
2019
The evaluation of RNA-Seq de novo assembly by PacBio long read sequencing
Y Yang, M Gribskov
bioRxiv, 735621, 2019
22019
Transcriptome analysis identifies metallothionein as biomarkers to predict recurrence in hepatocellular cacinoma
S Wang, M Gribskov
Molecular Genetics & Genomic Medicine 7 (6), e693, 2019
62019
Three genes define a bacterial-like arsenic tolerance mechanism in the arsenic hyperaccumulating fern Pteris vittata
C Cai, NA Lanman, KA Withers, AM DeLeon, Q Wu, M Gribskov, DE Salt, ...
Current Biology 29 (10), 1625-1633. e3, 2019
482019
Identification of sequence patterns, motifs and domains
M Gribskov
Encyclopedia of Bioinformatics and Computational Biology, 332-340, 2019
82019
MicroRNA and lncRNA Databases and Analysis
X Sun, M Gribskov
Academic Press, 2019
12019
Intelligent agents: Multi-agent systems
A Garro, M Mühlhäuser, A Tundis, M Baldoni, C Baroglio, F Bergenti, ...
Encyclopedia of Bioinformatics and Computational Biology: ABC of …, 2018
352018
COACT: a query interface language for collaborative databases
K Mershad, QM Malluhi, M Ouzzani, M Tang, M Gribskov, WG Aref, ...
Distributed and Parallel Databases 36, 121-151, 2018
42018
AUDIT: approving and tracking updates with dependencies in collaborative databases
K Mershad, QM Malluhi, M Ouzzani, M Tang, M Gribskov, WG Aref
Distributed and Parallel Databases 36, 81-119, 2018
42018
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Articles 1–20