A Diffusion-Based Approach for Simulating Forward-in-Time State-Dependent Speciation and Extinction Dynamics AC Soewongsono, MJ Landis ArXiv, 2024 | | 2024 |
Deep learning and likelihood approaches for viral phylogeography converge on the same answers whether the inference model is right or wrong A Thompson, B Liebeskind, EJ Scully, M Landis Systematic Biology, syad074, 2024 | 6 | 2024 |
phyddle: software to fit phylogenetic models with deep learning MJ Landis, A Thompson https://github.com/mlandis/phyddle, 2024 | | 2024 |
PhyloJunction: a computational framework for simulating, developing, and teaching evolutionary models FK Mendes, MJ Landis bioRxiv, 2023 | | 2023 |
Testing relationships between multiple regional features and biogeographic processes of speciation, extinction, and dispersal SK Swiston, MJ Landis bioRxiv, 2023.06. 19.545613, 2023 | 2 | 2023 |
A global phylogeny of butterflies reveals their evolutionary history, ancestral hosts and biogeographic origins AY Kawahara, C Storer, APS Carvalho, DM Plotkin, FL Condamine, ... Nature ecology & evolution 7 (6), 903-913, 2023 | 50 | 2023 |
The build-up of the present-day tropical diversity of tetrapods I Quintero, MJ Landis, W Jetz, H Morlon Proceedings of the National Academy of Sciences 120 (20), e2220672120, 2023 | 10 | 2023 |
Genomics expands the mammalverse NS Upham, MJ Landis Science 380 (6643), 358-359, 2023 | 4 | 2023 |
Bayesian inference of admixture graphs on Native American and Arctic populations SV Nielsen, AH Vaughn, K Leppälä, MJ Landis, T Mailund, R Nielsen PLoS genetics 19 (2), e1010410, 2023 | 14 | 2023 |
Deep learning approaches to viral phylogeography are fast and as robust as likelihood methods to model misspecification A Thompson, B Liebeskind, EJ Scully, M Landis bioRxiv, 2023.02. 08.527714, 2023 | 2 | 2023 |
Cophylogenetic methods to untangle the evolutionary history of ecological interactions W Dismukes, MP Braga, DH Hembry, TA Heath, MJ Landis Annual Review of Ecology, Evolution, and Systematics 53 (1), 275-298, 2022 | 16 | 2022 |
Replicated radiation of a plant clade along a cloud forest archipelago MJ Donoghue, DAR Eaton, CA Maya-Lastra, MJ Landis, PW Sweeney, ... Nature Ecology & Evolution 6 (9), 1318-1329, 2022 | 17 | 2022 |
Lessons learned from organizing and teaching virtual phylogenetics workshops J Barido-Sottani, JA Justison, R Borges, JM Brown, W Dismukes, ... © 2022 The Authors, 2022 | | 2022 |
Phylogeny, species delimitation and ecological and morphological diversity of Characithecium (Monogenoidea: Dactylogyridae) EW Wendt, LR Malabarba, MP Braga, WA Boeger, M Landis, TP Carvalho Parasitology 149 (5), 700-716, 2022 | 2 | 2022 |
Phylogenetic inference of where species spread or split across barriers MJ Landis, I Quintero, MM Muñoz, F Zapata, MJ Donoghue Proceedings of the National Academy of Sciences 119 (13), e2116948119, 2022 | 15 | 2022 |
RevGadgets: an R Package for visualizing Bayesian phylogenetic analyses from RevBayes CM Tribble, WA Freyman, MJ Landis, JY Lim, J Barido‐Sottani, ... Methods in Ecology and Evolution 13 (2), 314-323, 2022 | 53 | 2022 |
Parallel power posterior analyses for fast computation of marginal likelihoods in phylogenetics S Höhna, MJ Landis, JP Huelsenbeck PeerJ 9, e12438, 2021 | 23 | 2021 |
Phylogenetic reconstruction of ancestral ecological networks through time for pierid butterflies and their host plants MP Braga, N Janz, S Nylin, F Ronquist, MJ Landis Ecology Letters 24 (10), 2134-2145, 2021 | 21 | 2021 |
Biogeographic dating of phylogenetic divergence times using priors and processes MJ Landis The Molecular Evolutionary Clock (ed. Simon Y. H. Ho), 135-155, 2021 | 6 | 2021 |
Modeling phylogenetic biome shifts on a planet with a past MJ Landis, EJ Edwards, MJ Donoghue Systematic Biology 70 (1), 86-107, 2021 | 38 | 2021 |