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| Retrospective analysis of acute myeloid leukemia using next generation cytogenomics identifies variants missed at diagnosis S Eacker, M Malig, M Wood, A Muratov, O Sala-Torra, I Liachko, C Yeung, ... Cancer Research 84 (6_Supplement), 5069-5069, 2024 | | 2024 |
| Analysis and culturing of the prototypic crAssphage reveals a phage-plasmid lifestyle DT Schmidtke, AS Hickey, I Liachko, G Sherlock, AS Bhatt bioRxiv, 2024 | 2 | 2024 |
| Method for the clustering of dna sequences I Liachko, ST Sullivan, K Langford, SM Eacker US Patent App. 18/361,671, 2024 | | 2024 |
| Cis-regulatory variations underlie phenotypic differentiation between Eastern and Western pigs Z Tang, Y Liu, Y Yang, Y Fu, G Yi, J Lian, B Xie, Y Yao, M Chen, Y Niu, ... Authorea Preprints, 2024 | | 2024 |
| Proxi-RIMS-seq2 applied to native microbiomes uncovers hundreds of known and novel m5C methyltransferase specificities. W Yang, Y Luyten, E Reister, H Mangelson, Z Sisson, B Auch, I Liachko, ... bioRxiv, 2024.07. 15.603628, 2024 | | 2024 |
| Evaluation of Acute Myeloid Leukemia Genomes using Genomic Proximity Mapping CCS Yeung, SM Eacker, O Sala-Torra, LW Beppu, DW Woolston, ... medRxiv, 2024.05. 31.24308228, 2024 | | 2024 |
| Highly accurate metagenome-assembled genomes from human gut microbiota using long-read assembly, binning, and consolidation methods DM Portik, X Feng, G Benoit, DJ Nasko, B Auch, SJ Bryson, R Cano, ... bioRxiv, 2024.05. 10.593587, 2024 | | 2024 |
| High-Resolution Proximity-Guided Cytogenomics Improves Patient Stratification and Uncovers New Variants in Acute Myeloid Leukemia S Eacker, M Malig, K Langford, A Muratov, M Wood, O Sala-Torra, ... Blood 142 (Supplement 1), 5980-5980, 2023 | | 2023 |
| Next-Generation Cytogenomics Using Proximity Ligation Technology on the AVITI Genome Sequencing Platform S Eacker, M Islam, K Langford, A Muratov, B Nelson, M Malig, ... JOURNAL OF MOLECULAR DIAGNOSTICS 25 (11), S9-S9, 2023 | | 2023 |
| 4. Comprehensive next generation cytogenomics improves risk stratification of acute myeloid leukemia S Eacker, A Muratov, M Malig, B Nelson, M Wood, M VanDyke, ... Cancer Genetics 278, 2, 2023 | | 2023 |
| Integrating chromatin conformation information in a self-supervised learning model improves metagenome binning H Ho, M Chovatia, R Egan, G He, Y Yoshinaga, I Liachko, R O’Malley, ... PeerJ 11, e16129, 2023 | | 2023 |
| Method for the clustering of DNA sequences I Liachko, ST Sullivan, K Langford, SM Eacker US Patent 11,753,637, 2023 | | 2023 |
| Method for large scale scaffolding of genome assemblies J Shendure, A Andrew, J Burton, J Kitzman, MJ Dunham, I Liachko US Patent 11,694,764, 2023 | | 2023 |
| Development of a field-deployable qPCR assay for real-time pest monitoring in algal cultivation systems MR Sanchez, E Denning, TC Biondi, B Hovde, S Eacker, S Getto, H Kaur, ... Algal Research 74, 103194, 2023 | 1 | 2023 |
| A contiguous de novo genome assembly of sugar beet EL10 (Beta vulgaris L.) JM McGrath, A Funk, P Galewski, S Ou, B Townsend, K Davenport, ... DNA Research 30 (1), dsac033, 2023 | 30 | 2023 |
| Chromosome conformation capture from tissue samples S Sullivan, ER MORRIS, K Langford, I Liachko, SM Eacker US Patent App. 17/774,756, 2022 | | 2022 |
| Next-Generation Cytogenomics: Genome-wide Mapping of Chromosomal Abnormalities in ER plus/PR plus Breast Cancer FFPE Tissues S Eacker, E Reister, M Malig, B Nelson, M Wood, M VanDyke, ... JOURNAL OF MOLECULAR DIAGNOSTICS 24 (10), S151-S151, 2022 | | 2022 |