| An approach for N-linked glycan identification from MS/MS spectra by target-decoy strategy W Sun, Y Liu, K Zhang Computational biology and chemistry, 2018 | 8 | 2018 |
| DISC: DISulfide linkage Characterization from tandem mass spectra Y Liu, W Sun, B Shan, K Zhang Bioinformatics 33 (23), 3861-3870, 2017 | 7 | 2017 |
| NBPMF: Novel Peptide Mass Fingerprinting Based on Network Inference Z Liang, G Lajoie, K Zhang International Journal of Cognitive Informatics and Natural Intelligence …, 2017 | 2 | 2017 |
| NBPMF: Novel network-based inference methods for peptide mass fingerprinting Z Liang, G Lajoie, K Zhang Cognitive Informatics & Cognitive Computing (ICCI* CC), 2017 IEEE 16th …, 2017 | 1 | 2017 |
| An Improved Approach for N-linked Glycan Structure Identification from HCD MS/MS Spectra W Sun, Y Liu, G Lajoie, B Ma, K Zhang IEEE/ACM transactions on computational biology and bioinformatics, 2017 | 9 | 2017 |
| Spectra library assisted de novo peptide sequencing for HCD and ETD spectra pairs Y Yan, K Zhang BMC bioinformatics 17 (17), 205-211, 2016 | 5 | 2016 |
| Similarity metric induced metrics with application in machine learning and bioinformatics K Zhang Cognitive Informatics & Cognitive Computing (ICCI* CC), 2016 IEEE 15th …, 2016 | 1 | 2016 |
| De Novo Sequencing Assisted Approach for Characterizing Mixture MS/MS Spectra Y Liu, W Sun, J John, G Lajoie, B Ma, K Zhang IEEE transactions on nanobioscience 15 (2), 166-176, 2016 | 3 | 2016 |
| An Effective Approach for Glycan Structure De Novo Sequencing From HCD Spectra W Sun, M Kuljanin, P Pittock, B Ma, K Zhang, GA Lajoie IEEE transactions on nanobioscience 15 (2), 177-184, 2016 | 6 | 2016 |
| A Novel Algorithm for Glycan de novo Sequencing Using Tandem Mass Spectrometry W Sun, GA Lajoie, B Ma, K Zhang International Symposium on Bioinformatics Research and Applications, 320-330, 2015 | 7 | 2015 |
| An Approach for Matching Mixture MS/MS Spectra with a Pair of Peptide Sequences in a Protein Database Y Liu, W Sun, G Lajoie, B Ma, K Zhang International Symposium on Bioinformatics Research and Applications, 223-234, 2015 | 1 | 2015 |
| An approach for peptide identification by de novo sequencing of mixture spectra Y Liu, B Ma, K Zhang, G Lajoie IEEE/ACM Transactions on Computational Biology and Bioinformatics, 2015 | 7 | 2015 |
| Pattern matching and local alignment for RNA structures S Chen, Z Wang, K Zhang arXiv preprint arXiv:1412.8246, 2014 | 5 | 2014 |
| An Effective Algorithm for Peptide de novo Sequencing from Mixture MS/MS Spectra. Y Liu, B Ma, K Zhang, GA Lajoie ISBRA, 126-137, 2014 | 5 | 2014 |
| An improved algorithm for tree edit distance with applications for RNA secondary structure comparison S Chen, K Zhang Journal of Combinatorial Optimization 27 (4), 778-797, 2014 | 15 | 2014 |
| Optimizing Spaced< formula formulatype W Li, B Ma, K Zhang IEEE/ACM Transactions on Computational Biology and Bioinformatics, 398-406, 2014 | | 2014 |
| Optimizing Spaced -mer Neighbors for Efficient Filtration in Protein Similarity Search W Li, B Ma, K Zhang IEEE/ACM transactions on computational biology and bioinformatics 11 (2 …, 2014 | 9 | 2014 |
| Algorithms for local similarity between forests Z Liang, K Zhang Journal of Combinatorial Optimization 27 (1), 14-31, 2014 | 2 | 2014 |
| Efficient filtration for similarity search with spaced k-mer neighbors W Li, B Ma, K Zhang Bioinformatics and Biomedicine (BIBM), 2012 IEEE International Conference on …, 2012 | 1 | 2012 |
| Algorithms for Forest Local Similarity Z Liang, K Zhang International Conference on Combinatorial Optimization and Applications, 163-175, 2012 | 2 | 2012 |
