| The Single-cell Pediatric Cancer Atlas: Open-source data and tools for single-cell transcriptomics of pediatric tumors AG Hawkins, JA Shapiro, SJ Spielman, DS Mejia, DV Prasad, N Ichihara, ... Cancer Research 84 (6_Supplement), 2859-2859, 2024 | | 2024 |
| The Single-cell Pediatric Cancer Atlas: Data portal and open-source tools for single-cell transcriptomics of pediatric tumors AG Hawkins, JA Shapiro, SJ Spielman, DS Mejia, D Venkatesh Prasad, ... bioRxiv, 2024.04. 19.590243, 2024 | | 2024 |
| OpenPBTA: The Open Pediatric Brain Tumor Atlas JA Shapiro, KS Gaonkar, SJ Spielman, CL Savonen, CJ Bethell, R Jin, ... Cell genomics 3 (7), 2023 | 21* | 2023 |
| The influence of oxygen and electronegativity on iron mineral chemistry throughout Earth’s history EK Moore, A Ostroverkhova, D Hummer, S Morrison, Y Peralta, ... Precambrian Research 386, 106960, 2023 | 7 | 2023 |
| Mineral Element Insiders and Outliers Play Crucial Roles in Biological Evolution EK Moore, DL Martinez, N Srivastava, SM Morrison, SJ Spielman Life 12 (7), 951, 2022 | 1 | 2022 |
| The expanding network of mineral chemistry throughout earth history reveals global shifts in crustal chemistry during the Proterozoic EK Moore, JJ Golden, SM Morrison, J Hao, SJ Spielman Scientific Reports 12 (1), 4956, 2022 | 6 | 2022 |
| Relative model selection of evolutionary substitution models can be sensitive to multiple sequence alignment uncertainty SJ Spielman, ML Miraglia BMC Ecology and Evolution 21, 1-11, 2021 | 3 | 2021 |
| Investigating iron redox evolution using the mineral chemistry network analysis platform, dragon E Moore, A Ostroverkhova, DR Hummer, SM Morrison, S Spielman Goldschmidt2021 Virtual, 4-9, 2021 | 1 | 2021 |
| OpenPBTA: An Open Pediatric Brain Tumor Atlas J Shapiro, C Savonen, C Bethell, K Gaonkar, Y Zhu, M Brown, N Duong, ... NEURO-ONCOLOGY 23, 40-40, 2021 | 1 | 2021 |
| OMIC-14. OPENPBTA: AN OPEN PEDIATRIC BRAIN TUMOR ATLAS J Shapiro, C Savonen, C Bethell, K Gaonkar, Y Zhu, M Brown, N Duong, ... Neuro-Oncology 23 (Supplement_1), i40-i40, 2021 | 1 | 2021 |
| Geological factors impacted cadmium availability and use as an alternative cofactor for zinc in the carbon fixation pathways of marine diatoms N Srivastava, SJ Spielman, SM Morrison, EK Moore Journal of Geophysical Research: Biogeosciences 126 (2), e2020JG005966, 2021 | 4 | 2021 |
| Rowan Faculty Panel on Open Access JP Grinias, SJ Spielman, A Novak, AT Johnson, K Behling, G Carrasco | | 2021 |
| Dragon: a new tool for exploring redox evolution preserved in the mineral record SJ Spielman, EK Moore Frontiers in Earth Science 8, 585087, 2020 | 9 | 2020 |
| Relative model fit does not predict topological accuracy in single-gene protein phylogenetics SJ Spielman Molecular biology and evolution 37 (7), 2110-2123, 2020 | 28 | 2020 |
| The evolving redox chemistry and bioavailability of vanadium in deep time EK Moore, J Hao, SJ Spielman, N Yee Geobiology 18 (2), 127-138, 2020 | 26 | 2020 |
| HyPhy 2.5—a customizable platform for evolutionary hypothesis testing using phylogenies SL Kosakovsky Pond, AFY Poon, R Velazquez, S Weaver, NL Hepler, ... Molecular biology and evolution 37 (1), 295-299, 2020 | 386 | 2020 |
| Relative model fit does not predict accuracy in single-gene protein phylogenetics SJ Spielman bioRxiv, 698860, 2019 | 1 | 2019 |
| Evolution of viral genomes: interplay between selection, recombination, and other forces SJ Spielman, S Weaver, SD Shank, BR Magalis, M Li, ... Evolutionary genomics: statistical and computational methods, 427-468, 2019 | 74* | 2019 |
| Gain‐of‐function experiments with bacteriophage lambda uncover residues under diversifying selection in nature R Maddamsetti, DT Johnson, SJ Spielman, KL Petrie, DS Marks, ... Evolution 72 (10), 2234-2243, 2018 | 15 | 2018 |
| Relative evolutionary rates in proteins are largely insensitive to the substitution model SJ Spielman, SL Kosakovsky Pond Molecular Biology and Evolution, 2018 | 19 | 2018 |
Claus WilkeProfessor, Department of Integrative Biology, The University of Texas at AustinVerified email at austin.utexas.edu