Defining and benchmarking open problems in single-cell analysis MD Luecken, S Gigante, DB Burkhardt, R Cannoodt, DC Strobl, ... Research Square, 2024 | 1 | 2024 |
Clinically compliant cryopreservation of differentiated retinal pigment epithelial cells L Baqué-Vidal, H Main, S Petrus-Reurer, AR Lederer, NE Beri, F Bär, ... Cytotherapy 26 (4), 340-350, 2024 | 1 | 2024 |
Specialized signaling centers direct cell fate and spatial organization in a limb organoid model E Skoufa, J Zhong, O Kahre, K Hu, G Tsissios, L Carrau, A Herrera, ... bioRxiv, 2024.07. 02.601324, 2024 | | 2024 |
Midbrain Dopaminergic Neuron Development is Regulated by Two Molecularly Distinct Subtypes of Radial Glia Cells ES Ásgrímsdóttir, LF Bassini, PR di Val Cervo, D Gyllborg, CP Pastor, ... bioRxiv, 2024.03. 08.584031, 2024 | | 2024 |
Spotiflow: accurate and efficient spot detection for imaging-based spatial transcriptomics with stereographic flow regression A Dominguez Mantes, A Herrera, I Khven, A Schlaeppi, E Kyriacou, ... bioRxiv, 2024.02. 01.578426, 2024 | | 2024 |
Statistical inference with a manifold-constrained RNA velocity model uncovers cell cycle speed modulations AR Lederer, M Leonardi, L Talamanca, A Herrera, C Droin, I Khven, ... BioRxiv, 2024.01. 18.576093, 2024 | 3 | 2024 |
Profiling the chromatin landscape of adult human oligodendroglia using single-cell epigenomics M Kabbe, L Seeker, E Agirre, K Carlstrom, FB Pohl, N Bestard-Cuche, ... Glia 71, E458-E458, 2023 | | 2023 |
The Key Players of CNS function: Exploring the Effects of Region, Age, and Sex on Human Glia Diversity LA Seeker, N Bestard-Cuche, S Jaekel, NL Kazakou, SMK Bostrand, ... Glia 71, E478-E479, 2023 | | 2023 |
Brain matters: unveiling the distinct contributions of region, age, and sex to glia diversity and CNS function LA Seeker, N Bestard-Cuche, S Jäkel, NL Kazakou, SMK Bøstrand, ... Acta Neuropathologica Communications 11 (1), 84, 2023 | 15 | 2023 |
Deconvolution of ex-vivo drug screening data and bulk tissue expression predicts the abundance and viability of cancer cell subpopulations A Coudray, R Forey, BB Haro, F Martins, J Carlevaro-Fita, S Sheppard, ... bioRxiv, 2023.05. 10.540140, 2023 | | 2023 |
Heterogeneity and developmental dynamics of mammalian neocortical progenitors LHA Alieh, A Herrera, G La Manno Current Opinion in Systems Biology 32, 100444, 2023 | 1 | 2023 |
The lipotype hypothesis G D’Angelo, G La Manno Nature Reviews Molecular Cell Biology 24 (1), 1-2, 2023 | 4 | 2023 |
Self-organizing in vitro mouse neural tube organoids mimic embryonic development JS Park, HA Hsiung, I Khven, G La Manno, MP Lutolf Development 149 (20), dev201052, 2022 | 12 | 2022 |
Pyro-Velocity: Probabilistic RNA Velocity inference from single-cell data Q Qin, E Bingham, G La Manno, DM Langenau, L Pinello bioRxiv, 2022.09. 12.507691, 2022 | 10 | 2022 |
Molecular profiling of stem cell-derived retinal pigment epithelial cell differentiation established for clinical translation S Petrus-Reurer, AR Lederer, L Baqué-Vidal, I Douagi, B Pannagel, ... Stem cell reports 17 (6), 1458-1475, 2022 | 19 | 2022 |
Sphingolipids control dermal fibroblast heterogeneity L Capolupo, I Khven, AR Lederer, L Mazzeo, G Glousker, S Ho, F Russo, ... Science 376 (6590), eabh1623, 2022 | 103* | 2022 |
Marked regional glial heterogeneity in the human white matter of the central nervous system LA Seeker, N Bestard-Cuche, S Jäkel, NL Kazakou, SMK Bøstrand, ... Biorxiv, 2022.03. 22.485367, 2022 | 6 | 2022 |
Clonal relations in the mouse brain revealed by single-cell and spatial transcriptomics M Ratz, L von Berlin, L Larsson, M Martin, JO Westholm, G La Manno, ... Nature neuroscience 25 (3), 285-294, 2022 | 69 | 2022 |
Confronting false discoveries in single-cell differential expression JW Squair, M Gautier, C Kathe, MA Anderson, ND James, TH Hutson, ... Nature communications 12 (5692), 2021 | 484 | 2021 |
Molecular architecture of the developing mouse brain G La Manno, K Siletti, A Furlan, D Gyllborg, E Vinsland, A Mossi Albiach, ... Nature 596 (7870), 92-96, 2021 | 333 | 2021 |