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Mark T. Holder
Mark T. Holder
Associate Professor of Ecology and Evolutionary Biology, University of Kansas
Verified email at ku.edu - Homepage
Title
Cited by
Year
A complete and dynamic tree of birds
EJ McTavish, JA Gerbracht, MT Holder, MJ Iliff, D Lepage, PC Rasmussen, ...
bioRxiv, 2024.05. 20.595017, 2024
12024
A COMPUTER PROGRAM THAT USES GENETIC DATA TO INFER THE MAXIMUM LIKELIHOOD ESTIMATES OF SPERM COMPETITION AND MULTIPLE PATERNITY
KL Kichler, MT Holder
EIGHTEENTH INTERNATIONAL SEA TURTLE SYMPOSIUM 6 (2), 41, 2000
2000
A Dirichlet process prior for estimating lineage-specific substitution rates
TA Heath, MT Holder, JP Huelsenbeck
Molecular biology and evolution 29 (3), 939-955, 2012
1102012
A justification for reporting the majority-rule consensus tree in Bayesian phylogenetics
MT Holder, J Sukumaran, PO Lewis
Systematic biology 57 (5), 814-821, 2008
972008
A supertree pipeline for summarizing phylogenetic and taxonomic information for millions of species
BD Redelings, MT Holder
PeerJ 5, e3058, 2017
522017
An algorithm for calculating the probability of classes of data patterns on a genealogy
JM Koch, MT Holder
Plos Currents 4, 2012
82012
Bayesian approaches to phylogenetic analysis
MT Holder, JA Sukumaran, RM Brown
Bayesian Modeling in Bioinformatics (DK Dey, S. Ghosh, and BK Mallick, eds …, 2010
22010
BEAGLE: an application programming interface and high-performance computing library for statistical phylogenetics
DL Ayres, A Darling, DJ Zwickl, P Beerli, MT Holder, PO Lewis, ...
Systematic biology 61 (1), 170-173, 2012
6822012
Bovine microsatellite dinucleotide repeat polymorphisms at the TEXAN-1, TEXAN-2, TEXAN-3, TEXAN-4 and TEXAN-5 loci.
DA Holder, E Arevalo, MT Holder, JF Taylor, SK Davis
171994
Bovine microsatellite dinucleotide repeat polymorphisms at the TEXAN11, TEXAN12, TEXAN13, TEXAN14 and TEXAN15 loci.
BM Burns, JF Taylor, KL Herring, AD Herring, MT Holder, JS Collins, ...
251995
Bovine microsatellite mononucleotide and dinucleotide repeat polymorphisms at the TEXAN6, TEXAN7, TEXAN8, TEXAN9 and TEXAN10 loci.
BM Burns, JF Taylor, KL Herring, AD Herring, MT Holder, JS Collins, ...
171995
Caprine microsatellite dinucleotide repeat polymorphisms at the SR-CRSP 21, 22, 23, 24, 25, 26, and 27 loci
CC Yeb, JK Kogi, MT Holder, TM Guerra, SK Davis, JF Taylor
Anim. Genet 28, 370-371, 1997
71997
Caprine microsatellite dinucleotide repeat polymorphisms at the SR-CRSP21, SR-CRSP22, SR-CRSP23, SR-CRSP24, SR-CRSP25, SR-CRSP26 and SR-CRSP27 loci.
CC Yeh, JK Kogi, MT Holder, TM Guerra, SK Davis, JF Taylor
161997
Copulas and their potential for ecology
S Ghosh, LW Sheppard, MT Holder, TD Loecke, PC Reid, JD Bever, ...
Advances in Ecological Research 62, 409-468, 2020
312020
DendroPy 5: a mature Python library for phylogenetic computing
MA Moreno, J Sukumaran, MT Holder
arXiv preprint arXiv:2405.14120, 2024
2024
DendroPy: a Python library for phylogenetic computing
J Sukumaran, MT Holder
Bioinformatics 26 (12), 1569-1571, 2010
17002010
Detection of multiple paternity in the Kemp's ridley sea turtle with limited sampling
Kichler, Holder, Owens
Molecular Ecology 8 (5), 819-830, 1999
1511999
Difficulties in detecting hybridization
MT Holder, JA Anderson, AK Holloway
Systematic Biology 50 (6), 978-982, 2001
2002001
Estimating phylogenetic trees from pairwise likelihoods and posterior probabilities of substitution counts
MT Holder, M Steel
Journal of theoretical biology 280 (1), 159-166, 2011
62011
Estimating trees from filtered data: identifiability of models for morphological phylogenetics
ES Allman, MT Holder, JA Rhodes
Journal of Theoretical Biology 263 (1), 108-119, 2010
272010
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