Articles with public access mandates - Hyungro LeeLearn more
Not available anywhere: 2
BioVLAB-MMIA: a cloud environment for microRNA and mRNA integrated analysis (MMIA) on Amazon EC2
H Lee, Y Yang, H Chae, S Nam, D Choi, P Tangchaisin, C Herath, ...
IEEE transactions on nanobioscience 11 (3), 266-272, 2012
Mandates: US National Institutes of Health
Large-Scale Molecular Dynamics Simulations of Cellular Compartments
E Wilson, J Vant, J Layton, R Boyd, H Lee, M Turilli, B Hernández, ...
Structure and Function of Membrane Proteins, 335-356, 2021
Mandates: US Department of Energy, US National Institutes of Health
Available somewhere: 17
Evaluation of production serverless computing environments
H Lee, K Satyam, G Fox
2018 IEEE 11th International Conference on Cloud Computing (CLOUD), 442-450, 2018
Mandates: US National Science Foundation
AI-driven multiscale simulations illuminate mechanisms of SARS-CoV-2 spike dynamics
L Casalino, AC Dommer, Z Gaieb, EP Barros, T Sztain, SH Ahn, A Trifan, ...
The International Journal of High Performance Computing Applications 35 (5 …, 2021
Mandates: US National Science Foundation, US Department of Energy, US National …
High-throughput virtual screening and validation of a SARS-CoV-2 main protease noncovalent inhibitor
A Clyde, S Galanie, DW Kneller, H Ma, Y Babuji, B Blaiszik, A Brace, ...
Journal of chemical information and modeling 62 (1), 116-128, 2021
Mandates: US Department of Energy
Deepdrivemd: Deep-learning driven adaptive molecular simulations for protein folding
H Lee, M Turilli, S Jha, D Bhowmik, H Ma, A Ramanathan
2019 IEEE/ACM Third Workshop on Deep Learning on Supercomputers (DLS), 12-19, 2019
Mandates: US National Science Foundation, US Department of Energy
# COVIDisAirborne: AI-enabled multiscale computational microscopy of delta SARS-CoV-2 in a respiratory aerosol
A Dommer, L Casalino, F Kearns, M Rosenfeld, N Wauer, SH Ahn, ...
The international journal of high performance computing applications 37 (1 …, 2023
Mandates: US National Science Foundation, US Department of Energy, US National …
Impeccable: Integrated modeling pipeline for covid cure by assessing better leads
AA Saadi, D Alfe, Y Babuji, A Bhati, B Blaiszik, A Brace, T Brettin, K Chard, ...
Proceedings of the 50th International Conference on Parallel Processing, 1-12, 2021
Mandates: US Department of Energy, US National Institutes of Health, UK Medical …
MGEScan: a Galaxy-based system for identifying retrotransposons in genomes
H Lee, M Lee, W Mohammed Ismail, M Rho, GC Fox, S Oh, H Tang
Bioinformatics 32 (16), 2502-2504, 2016
Mandates: US National Science Foundation
Extensible and Scalable Adaptive Sampling on Supercomputers
E Hruska, V Balasubramanian, H Lee, S Jha, C Clementi
Journal of Chemical Theory and Computation, 2020
Mandates: US National Science Foundation, US Department of Energy
Scalable HPC & AI infrastructure for COVID-19 therapeutics
H Lee, A Merzky, L Tan, M Titov, M Turilli, D Alfe, A Bhati, A Brace, ...
Proceedings of the Platform for Advanced Scientific Computing Conference, 1-13, 2021
Mandates: US Department of Energy, UK Medical Research Council, European Commission
Coupling streaming ai and hpc ensembles to achieve 100–1000× faster biomolecular simulations
A Brace, I Yakushin, H Ma, A Trifan, T Munson, I Foster, A Ramanathan, ...
2022 IEEE International Parallel and Distributed Processing Symposium (IPDPS …, 2022
Mandates: US Department of Energy
Deep generative model driven protein folding simulations
H Ma, D Bhowmik, H Lee, M Turilli, M Young, S Jha, A Ramanathan
Parallel Computing: Technology Trends, 45-55, 2020
Mandates: US National Science Foundation, US Department of Energy
BioVLAB-MMIA: a reconfigurable cloud computing environment for microRNA and mRNA integrated analysis
H Lee, Y Yang, H Chae, S Nam, D Choi, P Tangchaisin, C Herath, ...
2011 IEEE International Conference on Bioinformatics and Biomedicine, 494-499, 2011
Mandates: US National Institutes of Health
Efficient Software Defined Systems Using Common Core Components
H Lee, GC Fox
2017 IEEE 10th International Conference on Cloud Computing (CLOUD), 407-414, 2017
Mandates: US National Science Foundation
Adaptive Ensemble Refinement of Protein Structures in High Resolution Electron Microscopy Density Maps with Radical Augmented Molecular Dynamics Flexible Fitting
D Sarkar, H Lee, JW Vant, M Turilli, JV Vermaas, S Jha, A Singharoy
Journal of Chemical Information and Modeling 63 (18), 5834-5846, 2023
Mandates: US National Science Foundation, US Department of Energy, US Department of …
Sparse Deep Neural Network Inference Using Different Programming Models
H Lee, M Jain, S Ghosh
2022 IEEE High Performance Extreme Computing Conference (HPEC), 1-6, 2022
Mandates: US Department of Energy
Teaching, learning and collaborating through cloud computing online classes
J Qiu, S Kamburugamuve, H Lee, J Mitchell, R Caldwell, G Bullock, ...
Proceedgins of the 2017 Workshop on Education for High-Performance Computing, 2017
Mandates: US National Science Foundation
Proxy Applications for Converged Workloads: DMC LDRD Initiative
S Ghosh, M Jain, H Lee, KJ Roche
Pacific Northwest National Laboratory (PNNL), Richland, WA (United States), 2023
Mandates: US Department of Energy
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