Articles with public access mandates - Ionas ErbLearn more
Available somewhere: 25
Multiple sequence alignment modeling: methods and applications
M Chatzou, C Magis, JM Chang, C Kemena, G Bussotti, I Erb, ...
Briefings in bioinformatics 17 (6), 1009-1023, 2016
Mandates: Government of Spain
Genome and transcriptome analysis of the Mesoamerican common bean and the role of gene duplications in establishing tissue and temporal specialization of genes
A Vlasova, S Capella-Gutiérrez, M Rendón-Anaya, M Hernández-Oñate, ...
Genome biology 17, 1-18, 2016
Mandates: European Molecular Biology Laboratory, Government of Spain, Government of …
Extreme genomic erosion after recurrent demographic bottlenecks in the highly endangered Iberian lynx
F Abascal, A Corvelo, F Cruz, JL Villanueva-Cañas, A Vlasova, ...
Genome biology 17, 1-19, 2016
Mandates: UK Biotechnology and Biological Sciences Research Council, Government of Spain
The functional importance of telomere clustering: global changes in gene expression result from SIR factor dispersion
A Taddei, G Van Houwe, S Nagai, I Erb, E van Nimwegen, SM Gasser
Genome research 19 (4), 611-625, 2009
Mandates: Swiss National Science Foundation
Alignathon: a competitive assessment of whole-genome alignment methods
D Earl, N Nguyen, G Hickey, RS Harris, S Fitzgerald, K Beal, I Seledtsov, ...
Genome research 24 (12), 2077-2089, 2014
Mandates: US Department of Energy, US National Institutes of Health, Howard Hughes …
MotEvo: integrated Bayesian probabilistic methods for inferring regulatory sites and motifs on multiple alignments of DNA sequences
P Arnold, I Erb, M Pachkov, N Molina, E van Nimwegen
Bioinformatics 28 (4), 487-494, 2012
Mandates: Swiss National Science Foundation
How should we measure proportionality on relative gene expression data?
I Erb, C Notredame
Theory in Biosciences 135, 21-36, 2016
Mandates: Government of Spain
Third Report on Chicken Genes and Chromosomes 2015Prepared by
M Schmid, J Smith, DW Burt, BL Aken, PB Antin, AL Archibald, C Ashwell, ...
Cytogenetic and genome research 145 (2), 78-179, 2015
Mandates: US National Institutes of Health, UK Biotechnology and Biological Sciences …
Transcription factor binding site positioning in yeast: proximal promoter motifs characterize TATA-less promoters
I Erb, E van Nimwegen
PLoS One 6 (9), e24279, 2011
Mandates: Swiss National Science Foundation
Impaired development of neocortical circuits contributes to the neurological alterations in DYRK1A haploinsufficiency syndrome
J Arranz, E Balducci, K Arató, G Sánchez-Elexpuru, S Najas, A Parras, ...
Neurobiology of disease 127, 210-222, 2019
Mandates: US National Institutes of Health, Government of Spain
Genome-wide expression profiling, in vivo DNA binding analysis, and probabilistic motif prediction reveal novel Abf1 target genes during fermentation, respiration, and …
U Schlecht, I Erb, P Demougin, N Robine, V Borde, E Nimwegen, ...
Molecular biology of the cell 19 (5), 2193-2207, 2008
Mandates: Swiss National Science Foundation
Principal component analysis of the effects of environmental enrichment and (-)-epigallocatechin-3-gallate on age-associated learning deficits in a mouse model of Down syndrome
S Catuara-Solarz, J Espinosa-Carrasco, I Erb, K Langohr, C Notredame, ...
Frontiers in behavioral neuroscience 9, 330, 2015
Mandates: Government of Spain
Large multiple sequence alignments with a root-to-leaf regressive method
E Garriga, P Di Tommaso, C Magis, I Erb, L Mansouri, A Baltzis, ...
Nature biotechnology 37 (12), 1466-1470, 2019
Mandates: European Commission, Government of Spain
Combined treatment With environmental enrichment And (-)-epigallocatechin-3-gallate ameliorates learning deficits And hippocampal alterations In A mouse model Of Down syndrome
S Catuara-Solarz, J Espinosa-Carrasco, I Erb, K Langohr, JR Gonzalez, ...
ENeuro 3 (5), 2016
Mandates: Government of Spain
BlastR—fast and accurate database searches for non-coding RNAs
G Bussotti, E Raineri, I Erb, M Zytnicki, A Wilm, E Beaudoing, P Bucher, ...
Nucleic acids research 39 (16), 6886-6895, 2011
Mandates: Swiss National Science Foundation
Examining microbe–metabolite correlations by linear methods
TP Quinn, I Erb
Nature Methods 18 (1), 37-39, 2021
Mandates: European Commission, Government of Spain
Extinction and reinstatement of an operant responding maintained by food in different models of obesity
A Burokas, E Martín‐García, J Espinosa‐Carrasco, I Erb, J McDonald, ...
Addiction biology 23 (2), 544-555, 2018
Mandates: Government of Spain
Differential proportionality–a normalization-free approach to differential gene expression
I Erb, T Quinn, D Lovell, C Notredame
bioRxiv, 134536, 2017
Mandates: Government of Spain
Time‐course and dynamics of obesity‐related behavioral changes induced by energy‐dense foods in mice
J Espinosa‐Carrasco, A Burokas, M Fructuoso, I Erb, E Martín‐García, ...
Addiction biology 23 (2), 531-543, 2018
Mandates: Government of Spain
Highly significant improvement of protein sequence alignments with AlphaFold2
A Baltzis, L Mansouri, S Jin, BE Langer, I Erb, C Notredame
Bioinformatics 38 (22), 5007-5011, 2022
Mandates: Government of Spain
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