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Yongkyu Kim
Yongkyu Kim
BIOMATZ
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Year
Bioaccumulation of therapeutic drugs by human gut bacteria
M Klünemann, S Andrejev, S Blasche, A Mateus, P Phapale, ...
Nature 597 (7877), 533-538, 2021
2192021
Metabolic cooperation and spatiotemporal niche partitioning in a kefir microbial community
S Blasche, Y Kim, RAT Mars, D Machado, M Maansson, E Kafkia, ...
Nature Microbiology 6 (2), 196-208, 2021
1942021
Pyrosequencing-Based Assessment of the Bacteria Diversity in Surface and Subsurface Peat Layers of a Northern Wetland, with Focus on Poorly Studied Phyla …
YM Serkebaeva, Y Kim, W Liesack, SN Dedysh
PloS one 8 (5), e63994, 2013
1922013
Polarization of microbial communities between competitive and cooperative metabolism
D Machado, OM Maistrenko, S Andrejev, Y Kim, P Bork, KR Patil, KR Patil
Nature ecology & evolution 5 (2), 195-203, 2021
1812021
Extraction of mRNA from soil
C Mettel, Y Kim, PM Shrestha, W Liesack
Applied and environmental microbiology 76 (17), 5995-6000, 2010
1312010
Differential assemblage of functional units in paddy soil microbiomes
Y Kim, W Liesack
PLoS One 10 (4), e0122221, 2015
792015
Identification of microbial populations driving biopolymer degradation in acidic peatlands by metatranscriptomic analysis
AA Ivanova, CE Wegner, Y Kim, W Liesack, SN Dedysh
Molecular ecology 25 (19), 4818-4835, 2016
722016
Telmatocola sphagniphila gen. nov., sp. nov., a Novel Dendriform Planctomycete from Northern Wetlands
IS Kulichevskaya, YM Serkebaeva, Y Kim, WIC Rijpstra, JSS Damsté, ...
Frontiers in microbiology 3, 146, 2012
632012
Model microbial communities for ecosystems biology
S Blasche, Y Kim, AP Oliveira, KR Patil
Current Opinion in Systems Biology 6, 51-57, 2017
532017
Ammonium induces differential expression of methane and nitrogen metabolism‐related genes in Methylocystis sp. strain SC2
B Dam, S Dam, Y Kim, W Liesack
Environmental microbiology 16 (10), 3115-3127, 2014
432014
Metatranscriptomics reveals the hydrolytic potential of peat-inhabiting Planctomycetes
AA Ivanova, CE Wegner, Y Kim, W Liesack, SN Dedysh
Antonie Van Leeuwenhoek 111, 801-809, 2018
422018
Adaptive laboratory evolution of microbial co‐cultures for improved metabolite secretion
D Konstantinidis, F Pereira, EM Geissen, K Grkovska, E Kafkia, P Jouhten, ...
Molecular systems biology 17 (8), e10189, 2021
302021
Finding functional differences between species in a microbial community: case studies in wine fermentation and kefir culture
C Melkonian, W Gottstein, S Blasche, Y Kim, M Abel-Kistrup, H Swiegers, ...
Frontiers in Microbiology 10, 1347, 2019
262019
Metabolic cooperation and spatiotemporal niche partitioning in a kefir microbial community. Nat Microbiol 6: 196–208
S Blasche, Y Kim, RAT Mars, D Machado, M Maansson, E Kafkia, ...
212021
Emergence of stable coexistence in a complex microbial community through metabolic cooperation and spatio-temporal niche partitioning
S Blasche, Y Kim, R Mars, E Kafkia, M Maansson, D Machado, B Teusink, ...
BioRxiv, 541870, 2019
172019
Polarization of microbial communities between competitive and cooperative metabolism. Nat. Ecol. Evol. 5, 195–203
D Machado, OM Maistrenko, S Andrejev, Y Kim, P Bork, KR Patil, KR Patil
102021
Polarization of microbial communities between competitive and cooperative metabolism. Nat Ecol Evol. 2020
D Machado, OM Maistrenko, S Andrejev, Y Kim, P Bork, KR Patil, KR Patil
6
Draft Genome Sequence of Corynebacterium kefirresidentii SB, Isolated from Kefir
S Blasche, Y Kim, KR Patil
Genome Announcements 5 (37), 10.1128/genomea. 00877-17, 2017
52017
Draft genome sequences of three novel low-abundance species strains isolated from kefir grain
Y Kim, S Blasche, KR Patil
Genome Announcements 5 (39), 10.1128/genomea. 00869-17, 2017
32017
Draft Genome Sequences of Five Fungal Strains Isolated from Kefir
S Marcišauskas, Y Kim, S Blasche, KR Patil, B Ji, J Nielsen
Microbiology Resource Announcements 10 (21), 10.1128/mra. 00195-21, 2021
12021
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Articles 1–20