Articles with public access mandates - Paola Vera-LiconaLearn more
Available somewhere: 10
Wisdom of crowds for robust gene network inference
D Marbach, JC Costello, R Küffner, NM Vega, RJ Prill, DM Camacho, ...
Nature Methods, 2012
Mandates: Swiss National Science Foundation, US National Institutes of Health, Howard …
Identification of a nerve-associated, lung-resident interstitial macrophage subset with distinct localization and immunoregulatory properties
BB Ural, ST Yeung, P Damani-Yokota, JC Devlin, M de Vries, ...
Science immunology 5 (45), eaax8756, 2020
Mandates: US National Institutes of Health
Discretization of time series data
ES Dimitrova, MPV Licona, J McGee, R Laubenbacher
Journal of Computational Biology 17 (6), 853-868, 2010
Mandates: US National Institutes of Health
CD169+ macrophages orchestrate innate immune responses by regulating bacterial localization in the spleen
OA Perez, ST Yeung, P Vera-Licona, PA Romagnoli, T Samji, BB Ural, ...
Science immunology 2 (16), eaah5520, 2017
Mandates: US National Institutes of Health
Chromatin interaction networks revealed unique connectivity patterns of broad H3K4me3 domains and super enhancers in 3D chromatin
A Thibodeau, EJ Márquez, DG Shin, P Vera-Licona, D Ucar
Scientific Reports 7 (1), 14466, 2017
Mandates: US National Institutes of Health
AlgoRun: a Docker-based packaging system for platform-agnostic implemented algorithms
A Hosny, P Vera-Licona, R Laubenbacher, T Favre
Bioinformatics 32 (15), 2396-2398, 2016
Mandates: US National Science Foundation, US National Institutes of Health
An Algebra-Based Method for Inferring Gene Regulatory Networks
P Vera-Licona, A Jarrah, LD Garcia-Puente, J McGee, R Laubenbacher
BMC Systems Biology 8 (37), 2014
Mandates: US National Institutes of Health
Macrophage mediated recognition and clearance of Borrelia burgdorferi elicits MyD88-dependent and-independent phagosomal signals that contribute to phagocytosis and inflammation
SJ Benjamin, KL Hawley, P Vera-Licona, CJ La Vake, JL Cervantes, ...
BMC immunology 22 (1), 1-16, 2021
Mandates: US National Institutes of Health
QuIN: a web server for querying and visualizing chromatin interaction networks
A Thibodeau, EJ Márquez, O Luo, Y Ruan, F Menghi, DG Shin, ML Stitzel, ...
PLoS computational biology 12 (6), e1004809, 2016
Mandates: US National Institutes of Health
Benchmarking time-series data discretization on inference methods
Y Li, T Jann, P Vera-Licona
Bioinformatics 35 (17), 3102 - 3109, 2019
Mandates: US National Science Foundation
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