Delineation of an immunosuppressive gradient in hepatocellular carcinoma using high-dimensional proteomic and transcriptomic analyses V Chew, L Lai, L Pan, CJ Lim, J Li, R Ong, C Chua, JY Leong, KH Lim, ... Proceedings of the National Academy of Sciences 114 (29), E5900-E5909, 2017 | 218 | 2017 |
RASAL2 activates RAC1 to promote triple-negative breast cancer progression M Feng, Y Bao, Z Li, J Li, M Gong, S Lam, J Wang, DM Marzese, ... The Journal of clinical investigation 124 (12), 5291-5304, 2014 | 142 | 2014 |
A CD45‐based barcoding approach to multiplex mass‐cytometry (CyTOF) L Lai, R Ong, J Li, S Albani Cytometry Part A 87 (4), 369-374, 2015 | 90 | 2015 |
Oncogenic KRAS-associated gene signature defines co-targeting of CDK4/6 and MEK as a viable therapeutic strategy in colorectal cancer M Pek, S Yatim, Y Chen, J Li, M Gong, X Jiang, F Zhang, J Zheng, X Wu, ... Oncogene 36 (35), 4975-4986, 2017 | 79 | 2017 |
Protein tyrosine phosphatase UBASH3B is overexpressed in triple-negative breast cancer and promotes invasion and metastasis ST Lee, M Feng, Y Wei, Z Li, Y Qiao, P Guan, X Jiang, CH Wong, K Huynh, ... Proceedings of the National Academy of Sciences 110 (27), 11121-11126, 2013 | 79 | 2013 |
Genomic Binding Profiling of the Fission Yeast Stress-Activated MAPK Sty1 and the bZIP Transcriptional Activator Atf1 in Response to H2O2 M Eshaghi, JH Lee, L Zhu, SY Poon, J Li, KH Cho, Z Chu, RKM Karuturi, ... PloS one 5 (7), e11620, 2010 | 71 | 2010 |
Modulation of Cell Cycle–specific Gene Expressions at the Onset of S Phase Arrest Contributes to the Robust DNA Replication Checkpoint Response in Fission Yeas Z Chu, J Li, M Eshaghi, X Peng, RKM Karuturi, J Liu Molecular biology of the cell 18 (5), 1756-1767, 2007 | 37 | 2007 |
Histone H3 lysine 4 monomethylation (H3K4me1) and H3 lysine 9 monomethylation (H3K9me1): Distribution and their association in regulating gene expression under hyperglycaemic … J Gupta, S Kumar, J Li, RKM Karuturi, K Tikoo Biochimie 94 (12), 2656-2664, 2012 | 32 | 2012 |
Global Profiling of DNA Replication Timing and Efficiency Reveals that Efficient Replication/Firing Occurs Late during S-Phase in S. pombe M Eshaghi, RKM Karuturi, J Li, Z Chu, ET Liu, J Liu PLoS One 2 (8), e722, 2007 | 32 | 2007 |
Functional characterization of D9, a novel deazaneplanocin A (DZNep) analog, in targeting acute myeloid leukemia (AML) X Jiang, CZH Lim, Z Li, PL Lee, SMJM Yatim, P Guan, J Li, J Zhou, J Pan, ... PLoS One 10 (4), e0122983, 2015 | 22 | 2015 |
Development and application of a transcriptional sensor for detection of heterologous acrylic acid production in E. coli SS Raghavan, S Chee, J Li, J Poschmann, N Nagarajan, S Jia Wei, ... Microbial cell factories 18 (1), 1-12, 2019 | 19 | 2019 |
The importance of study design for detecting differentially abundant features in high-throughput experiments H Luo, J Li, BKH Chia, P Robson, N Nagarajan Genome biology 15 (12), 1-17, 2014 | 16 | 2014 |
Genome-wide estimation of firing efficiencies of origins of DNA replication from time-course copy number variation data H Luo, J Li, M Eshaghi, J Liu, R Karuturi BMC bioinformatics 11 (1), 1-15, 2010 | 15 | 2010 |
ConReg-R: Extrapolative recalibration of the empirical distribution of p-values to improve false discovery rate estimates J Li, P Paramita, KP Choi, RKM Karuturi Biology direct 6, 1-14, 2011 | 13 | 2011 |
Disease gene explorer: display disease gene dependency by combining bayesian networks with clustering Q Diao, W Hu, H Zhong, J Li, F Xue, T Wang, Y Zhang Proceedings. 2004 IEEE Computational Systems Bioinformatics Conference, 2004 …, 2004 | 11 | 2004 |
Transcriptional profiling analysis of individual kinase-deletion strains of fission yeast in response to nitrogen starvation J Liu, Y Jia, J Li, Z Chu Molecular Genetics and Genomics 290, 1067-1083, 2015 | 5 | 2015 |
Stepped linear regression to accurately assess statistical significance in batch confounded differential expression analysis J Li, J Liu, RKM Karuturi Bioinformatics Research and Applications: Fourth International Symposium …, 2008 | 4 | 2008 |
Iterative piecewise linear regression to accurately assess statistical significance in batch confounded differential expression analysis J Li, KP Choi, RKM Karuturi International Symposium on Bioinformatics Research and Applications, 153-164, 2012 | 3 | 2012 |
Deconvolution of chromatin immunoprecipitation-microarray (ChIP-chip) analysis of MBF occupancies reveals the temporal recruitment of Rep2 at the MBF target genes M Eshaghi, L Zhu, Z Chu, J Li, CS Chan, A Shahab, RKM Karuturi, J Liu Eukaryotic cell 10 (1), 130-141, 2011 | 3 | 2011 |
Deciphering transcription factor binding patterns from genome-wide high density ChIP-chip tiling array data J Li, L Zhu, M Eshaghi, J Liu, KMR Karuturi BMC proceedings 5, 1-11, 2011 | 2 | 2011 |