Articles with public access mandates - Eric RivalsLearn more
Available somewhere: 25
Computational pan-genomics: status, promises and challenges
Briefings in Bioinformatics 19 (1), 118-135, 2016
Mandates: US National Institutes of Health, National Natural Science Foundation of …
Accurate self-correction of errors in long reads using de Bruijn graphs
L Salmela, R Walve, E Rivals, E Ukkonen
Bioinformatics 33 (6), 799-806, 2017
Mandates: Academy of Finland
De novo assembly of viral quasispecies using overlap graphs
JA Baaijens, AZ El Aabidine, E Rivals, A Schönhuth
Genome Research 27 (5), 835-848, 2017
Mandates: Netherlands Organisation for Scientific Research
FTO-mediated cytoplasmic m6Am demethylation adjusts stem-like properties in colorectal cancer cell
S Relier, J Ripoll, H Guillorit, A Amalric, C Achour, F Boissière, J Vialaret, ...
Nature communications 12 (1), 1716, 2021
Mandates: National Institute of Health and Medical Research, France, Agence Nationale …
An improved genome of the model marine alga Ostreococcus tauri unfolds by assessing Illumina de novo assemblies
R Blanc-Mathieu, B Verhelst, E Derelle, S Rombauts, FY Bouget, I Carré, ...
BMC genomics 15 (1), 1103, 2014
Mandates: US Department of Energy
Population genomics of picophytoplankton unveils novel chromosome hypervariability
R Blanc-Mathieu, M Krasovec, M Hebrard, S Yau, E Desgranges, J Martin, ...
Science Advances 3 (7), e1700239, 2017
Mandates: US Department of Energy, European Commission
NF-Y controls fidelity of transcription initiation at gene promoters through maintenance of the nucleosome-depleted region
AJ Oldfield, T Henriques, D Kumar, AB Burkholder, S Cinghu, D Paulet, ...
Nature Communications 10 (1), 3072, 2019
Mandates: US National Institutes of Health, Agence Nationale de la Recherche
Alteration of ribosome function upon 5-fluorouracil treatment favors cancer cell drug-tolerance
G Therizols, Z Bash-Imam, B Panthu, C Machon, A Vincent, J Ripoll, ...
Nature Communications 13 (1), 173, 2022
Mandates: National Institute of Health and Medical Research, France, Agence Nationale …
The multifaceted functions of the Fat mass and Obesity-associated protein (FTO) in normal and cancer cells
S Relier, E Rivals, A David
RNA biology 19 (1), 132-142, 2022
Mandates: National Institute of Health and Medical Research, France, Agence Nationale …
Functional analysis of Plasmodium falciparum subpopulations associated with artemisinin resistance in Cambodia
A Dwivedi, C Reynes, A Kuehn, DB Roche, N Khim, M Hebrard, ...
Malaria journal 16 (1), 493, 2017
Mandates: Wellcome Trust
Linking indexing data structures to de Bruijn graphs: Construction and update
B Cazaux, T Lecroq, E Rivals
Journal of Computer and System Sciences 104, 165-183, 2019
Mandates: Agence Nationale de la Recherche
Hierarchical overlap graph
B Cazaux, E Rivals
Information Processing Letters 155, 105862, 2020
Mandates: Agence Nationale de la Recherche
PEWO: a collection of workflows to benchmark phylogenetic placement
B Linard, N Romashchenko, F Pardi, E Rivals
Bioinformatics 36 (21), 5264-5266, 2020
Mandates: Agence Nationale de la Recherche
Colib’read on galaxy: a tools suite dedicated to biological information extraction from raw NGS reads
Y Le Bras, O Collin, C Monjeaud, V Lacroix, É Rivals, C Lemaitre, V Miele, ...
GigaScience 5 (1), s13742-015-0105-2, 2016
Mandates: Academy of Finland
AQUAPONY: visualization and interpretation of phylogeographic information on phylogenetic trees
B Cazaux, G Castel, E Rivals
Bioinformatics 35 (17), 3163-3165, 2019
Mandates: Agence Nationale de la Recherche
Multivariate Analysis of RNA Chemistry Marks Uncovers Epitranscriptomics-Based Biomarker Signature for Adult Diffuse Glioma Diagnostics
S Relier, A Amalric, A Attina, IB Koumare, V Rigau, F Burel Vandenbos, ...
Analytical chemistry 94 (35), 11967-11972, 2022
Mandates: National Institute of Health and Medical Research, France, Swiss Cancer League
FT-GPI, a highly sensitive and accurate predictor of GPI-anchored proteins, reveals the composition and evolution of the GPI proteome in Plasmodium species
LM Sauer, R Cánovas, D Roche, H Shams-Eldin, P Ravel, J Colinge, ...
Malaria Journal 22 (1), 27, 2023
Mandates: US National Institutes of Health, European Commission, Agence Nationale de …
Rapid screening and detection of inter-type viral recombinants using phylo-k-mers
GE Scholz, B Linard, N Romashchenko, E Rivals, F Pardi
Bioinformatics 36 (22-23), 5351-5360, 2020
Mandates: Agence Nationale de la Recherche
Efficient Construction of Hierarchical Overlap Graphs
SG Park, B Cazaux, K Park, E Rivals
International Symposium on String Processing and Information Retrieval, 277-290, 2020
Mandates: Agence Nationale de la Recherche
Mass Spectrometry-Based Pipeline for Identifying RNA Modifications Involved in a Functional Process: Application to Cancer Cell Adaptation
A Amalric, A Attina, A Bastide, M Buffard, S Mateus, C Planque, E Rivals, ...
Analytical Chemistry 96 (5), 1825-1833, 2024
Mandates: Swiss Cancer League
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