Partho Sen

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	All	Since 2019
Citations	1883	1641
h-index	21	20
i10-index	27	26

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Matej OrešičProfessor of Medicine (Systems Medicine), Örebro University & University of TurkuVerified email at oru.se
Tuulia HyötyläinenÖrebro UniversityVerified email at oru.se
Mikael KnipTutkimusjohtaja, Helsingin yliopistoVerified email at helsinki.fi
Jens NielsenProfessor in Systems Biology, Chalmers University of Technology, SwedenVerified email at chalmers.se
Jorma ToppariProfessor of Physiology, University of TurkuVerified email at utu.fi
Sakda KhoomrungFaculty of Medicine Siriraj Hospital, Mahidol University ThailandVerified email at mahidol.edu
Jeremy K NicholsonAustralian National Phenome Center, Murdoch University + Imperial College LondonVerified email at murdoch.edu.au
Thomas F WebsterProfessor of Environmental Health, Boston University School of Public HealthVerified email at bu.edu
Hannele Yki-JärvinenSisätautiopin professoriVerified email at helsinki.fi
Riitta LahesmaaProfessor, Director, Turku Centre for Biotechnology, University of Turku, FInlandVerified email at utu.fi
Ovidiu RadulescuProfessor at University of MontpellierVerified email at umontpellier.fr
Quentin M. AnsteeProfessor of Experimental Hepatology, Newcastle University, UKVerified email at newcastle.ac.uk
Omid RasoolUniversity of TurkuVerified email at btk.fi
Antonio Vidal-puigProf Molecular Nutrition and Metabolism, Univeristy of CambridgeVerified email at cam.ac.uk
Jörn SchattenbergSaarland University Medical CenterVerified email at uni-saarland.de
Tommi VatanenAssociate Professor, University of HelsinkiVerified email at helsinki.fi
Jaana SuvisaariResearch Professor, National Institute for Health and WelfareVerified email at thl.fi
Oluf PedersenProfessor of Metabolic Genetics, University of CopenhagenVerified email at sund.ku.dk
Moritz von ScheidtDeutsches Herzzentrum München, Technische Universität MünchenVerified email at tum.de
Henrik Bjørn NielsenChief Scientific Officer, Clinical-Microbiomics A/SVerified email at clinical-microbiomics.com

Partho Sen

Data Scientist, Mayo Clinic, Rochester, MN, USA

Verified email at mayo.edu - Homepage

Precision Medicine Systems Biology Computational Biology Bioinformatics


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Quantifying diet-induced metabolic changes of the human gut microbiome S Shoaie, P Ghaffari, P Kovatcheva-Datchary, A Mardinoglu, P Sen, ... Cell metabolism 22 (2), 320-331, 2015	402	2015
Gut metabolome meets microbiome: A methodological perspective to understand the relationship between host and microbe S Lamichhane, P Sen, AM Dickens, M Orešič, HC Bertram Methods, 2018	177	2018
Exposure to environmental contaminants is associated with altered hepatic lipid metabolism in non-alcoholic fatty liver disease P Sen, S Qadri, PK Luukkonen, O Ragnarsdottir, A McGlinchey, S Jäntti, ... Journal of hepatology 76 (2), 283-293, 2022	164	2022
Evaluation and assessment of read-mapping by multiple next-generation sequencing aligners based on genome-wide characteristics S Thankaswamy-Kosalai, P Sen, I Nookaew Genomics 109 (3-4), 186–191, 2017	105	2017
Perspectives on systems modeling of human peripheral blood mononuclear cells P Sen, E Kemppainen, M Orešič Frontiers in molecular biosciences 4, 96, 2018	101	2018
Metabolic modeling of human gut microbiota on a genome scale: an overview P Sen, M Orešič Metabolites 9 (2), 22, 2019	89	2019
An overview of metabolomics data analysis: current tools and future perspectives S Lamichhane, P Sen, AM Dickens, T Hyötyläinen, M Orešič Comprehensive analytical chemistry 82, 387-413, 2018	81	2018
Deep learning meets metabolomics: a methodological perspective P Sen, S Lamichhane, VB Mathema, A McGlinchey, AM Dickens, ... Briefings in Bioinformatics 22 (2), 1531-1542, 2021	80	2021
Linking gut microbiome and lipid metabolism: moving beyond associations S Lamichhane, P Sen, MA Alves, HC Ribeiro, P Raunioniemi, ... Metabolites 11 (1), 55, 2021	77	2021
Dysregulated lipid metabolism precedes onset of psychosis AM Dickens, P Sen, MJ Kempton, N Barrantes-Vidal, C Iyegbe, ... Biological psychiatry 89 (3), 288-297, 2021	59	2021
Comparative systems analyses reveal molecular signatures of clinically tested vaccine adjuvants TA Olafsdottir, M Lindqvist, I Nookaew, P Andersen, J Maertzdorf, ... Scientific reports 6 (1), 39097, 2016	57	2016
Metabolic alterations in immune cells associate with progression to type 1 diabetes P Sen, AM Dickens, MA López-Bascón, T Lindeman, E Kemppainen, ... Diabetologia 63, 1017-1031, 2020	55	2020
Prenatal exposure to perfluoroalkyl substances modulates neonatal serum phospholipids, increasing risk of type 1 diabetes A McGlinchey, T Sinioja, S Lamichhane, P Sen, J Bodin, H Siljander, ... Environment International 143, 105935, 2020	44	2020
Systems biology approaches to study lipidomes in health and disease MA Alves, S Lamichhane, A Dickens, A McGlinchey, HC Ribeiro, P Sen, ... Biochimica et Biophysica Acta (BBA)-Molecular and Cell Biology of Lipids …, 2021	40	2021
Increased serum miR-193a-5p during non-alcoholic fatty liver disease progression: Diagnostic and mechanistic relevance K Johnson, PJ Leary, O Govaere, MJ Barter, SH Charlton, SJ Cockell, ... JHEP Reports 4 (2), 100409, 2022	37	2022
Persistent alterations in plasma lipid profiles before introduction of gluten in the diet associated with progression to celiac disease P Sen, C Carlsson, SM Virtanen, S Simell, H Hyöty, J Ilonen, J Toppari, ... Clinical and translational gastroenterology 10 (5), e00044, 2019	37	2019
Deep learning facilitates multi-data type analysis and predictive biomarker discovery in cancer precision medicine VB Mathema, P Sen, S Lamichhane, M Orešič, S Khoomrung Computational and Structural Biotechnology Journal 21, 1372-1382, 2023	34	2023
Early-life exposure to perfluorinated alkyl substances modulates lipid metabolism in progression to celiac disease L Sinisalu, P Sen, S Salihovic, S Virtanen, H Hyoty, J Ilonen, J Toppari, ... Environmental Research 188, 109864, 2020	28	2020
Dysregulation of secondary bile acid metabolism precedes islet autoimmunity and type 1 diabetes S Lamichhane, P Sen, AM Dickens, MA Alves, T Härkönen, J Honkanen, ... Cell Reports Medicine 3 (10), 2022	26	2022
Kinetic modelling of phospholipid synthesis in Plasmodium knowlesi unravels crucial steps and relative importance of multiple pathways P Sen, HJ Vial, O Radulescu BMC systems biology 7, 1-16, 2013	26	2013

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