Prodigal: prokaryotic gene recognition and translation initiation site identification D Hyatt, GL Chen, PF LoCascio, ML Land, FW Larimer, LJ Hauser BMC bioinformatics 11, 1-11, 2010 | 9504 | 2010 |
Genome divergence in two Prochlorococcus ecotypes reflects oceanic niche differentiation G Rocap, FW Larimer, J Lamerdin, S Malfatti, P Chain, NA Ahlgren, ... Nature 424 (6952), 1042-1047, 2003 | 1301 | 2003 |
Insights from 20 years of bacterial genome sequencing M Land, L Hauser, SR Jun, I Nookaew, MR Leuze, TH Ahn, T Karpinets, ... Functional & integrative genomics 15, 141-161, 2015 | 887 | 2015 |
Complete genome sequence of the metabolically versatile photosynthetic bacterium Rhodopseudomonas palustris FW Larimer, P Chain, L Hauser, J Lamerdin, S Malfatti, L Do, ML Land, ... Nature biotechnology 22 (1), 55-61, 2004 | 872 | 2004 |
Insights into the evolution of Yersinia pestis through whole-genome comparison with Yersinia pseudotuberculosis PSG Chain, E Carniel, FW Larimer, J Lamerdin, PO Stoutland, ... Proceedings of the National Academy of Sciences 101 (38), 13826-13831, 2004 | 806 | 2004 |
The genome of a motile marine Synechococcus B Palenik, B Brahamsha, FW Larimer, M Land, L Hauser, P Chain, ... Nature 424 (6952), 1037-1042, 2003 | 788 | 2003 |
Complete Genome Sequence of the Ammonia-Oxidizing Bacterium and Obligate Chemolithoautotroph Nitrosomonas europaea P Chain, J Lamerdin, F Larimer, W Regala, V Lao, M Land, L Hauser, ... Journal of bacteriology 185 (9), 2759-2773, 2003 | 690 | 2003 |
Gene and translation initiation site prediction in metagenomic sequences D Hyatt, PF LoCascio, LJ Hauser, EC Uberbacher Bioinformatics 28 (17), 2223-2230, 2012 | 544 | 2012 |
Burkholderia xenovorans LB400 harbors a multi-replicon, 9.73-Mbp genome shaped for versatility PSG Chain, VJ Denef, KT Konstantinidis, LM Vergez, L Agulló, VL Reyes, ... Proceedings of the National Academy of Sciences 103 (42), 15280-15287, 2006 | 421 | 2006 |
Enigmatic, ultrasmall, uncultivated Archaea BJ Baker, LR Comolli, GJ Dick, LJ Hauser, D Hyatt, BD Dill, ML Land, ... Proceedings of the National Academy of Sciences 107 (19), 8806-8811, 2010 | 356 | 2010 |
The Evolution of Host Specialization in the Vertebrate Gut Symbiont Lactobacillus reuteri SA Frese, AK Benson, GW Tannock, DM Loach, J Kim, M Zhang, PL Oh, ... PLoS genetics 7 (2), e1001314, 2011 | 355 | 2011 |
Mechanisms of thermal adaptation revealed from the genomes of the Antarctic Archaea Methanogenium frigidum and Methanococcoides burtonii NFW Saunders, T Thomas, PMG Curmi, JS Mattick, E Kuczek, R Slade, ... Genome research 13 (7), 1580-1588, 2003 | 325 | 2003 |
Targeted access to the genomes of low-abundance organisms in complex microbial communities M Podar, CB Abulencia, M Walcher, D Hutchison, K Zengler, JA Garcia, ... Applied and environmental microbiology 73 (10), 3205-3214, 2007 | 292 | 2007 |
Genome of the Epsilonproteobacterial Chemolithoautotroph Sulfurimonas denitrificans SM Sievert, KM Scott, MG Klotz, PSG Chain, LJ Hauser, J Hemp, ... Applied and environmental microbiology 74 (4), 1145-1156, 2008 | 271 | 2008 |
Complete Genome Sequence of Nitrosospira multiformis, an Ammonia-Oxidizing Bacterium from the Soil Environment JM Norton, MG Klotz, LY Stein, DJ Arp, PJ Bottomley, PSG Chain, ... Applied and environmental microbiology 74 (11), 3559-3572, 2008 | 252 | 2008 |
Genome Sequence of the Chemolithoautotrophic Nitrite-Oxidizing Bacterium Nitrobacter winogradskyi Nb-255 SR Starkenburg, PSG Chain, LA Sayavedra-Soto, L Hauser, ML Land, ... Applied and environmental microbiology 72 (3), 2050-2063, 2006 | 245 | 2006 |
The Genome Sequence of Psychrobacter arcticus 273-4, a Psychroactive Siberian Permafrost Bacterium, Reveals Mechanisms for Adaptation to Low-Temperature … HL Ayala-del-Río, PS Chain, JJ Grzymski, MA Ponder, N Ivanova, ... Applied and environmental microbiology 76 (7), 2304-2312, 2010 | 230 | 2010 |
Community genomic and proteomic analyses of chemoautotrophic iron-oxidizing “Leptospirillum rubarum”(Group II) and “Leptospirillum ferrodiazotrophum”(Group III) bacteria in … DSA Goltsman, VJ Denef, SW Singer, NC VerBerkmoes, M Lefsrud, ... Applied and environmental microbiology 75 (13), 4599-4615, 2009 | 217 | 2009 |
Whole‐genome analysis of the ammonia‐oxidizing bacterium, Nitrosomonas eutropha C91: implications for niche adaptation LY Stein, DJ Arp, PM Berube, PSG Chain, L Hauser, MSM Jetten, ... Environmental microbiology 9 (12), 2993-3007, 2007 | 205 | 2007 |
The genome sequence of the psychrophilic archaeon, Methanococcoides burtonii: the role of genome evolution in cold adaptation MA Allen, FM Lauro, TJ Williams, D Burg, KS Siddiqui, D De Francisci, ... The ISME journal 3 (9), 1012-1035, 2009 | 203 | 2009 |