ecc_finder: a robust and accurate tool for detecting extrachromosomal circular DNA from sequencing data P Zhang, H Peng, C Llauro, E Bucher, M Mirouze Frontiers in plant science 12, 743742, 2021 | 41 | 2021 |
Large tandem duplications affect gene expression, 3D organization, and plant–pathogen response A Picart-Picolo, S Grob, N Picault, M Franek, C Llauro, T Halter, TR Maier, ... Genome research 30 (11), 1583-1592, 2020 | 36 | 2020 |
Arabidopsis MLO2 is a negative regulator of sensitivity to extracellular reactive oxygen species F Cui, H Wu, O Safronov, P Zhang, R Kumar, H Kollist, J Salojärvi, ... Plant, Cell & Environment 41 (4), 782-796, 2018 | 27 | 2018 |
Chromosome‐level Thlaspi arvense genome provides new tools for translational research and for a newly domesticated cash cover crop of the cooler climates A Nunn, I Rodríguez‐Arévalo, Z Tandukar, K Frels, A Contreras‐Garrido, ... Plant biotechnology journal 20 (5), 944-963, 2022 | 26 | 2022 |
Extrachromosomal circular DNA and structural variants highlight genome instability in Arabidopsis epigenetic mutants P Zhang, A Mbodj, A Soundiramourtty, C Llauro, A Ghesquière, M Ingouff, ... Nature communications 14 (1), 5236, 2023 | 15 | 2023 |
Identification of extrachromosomal circular forms of active transposable elements using mobilome-seq S Lanciano, P Zhang, C Llauro, M Mirouze Plant transposable elements: methods and protocols, 87-93, 2021 | 15 | 2021 |
Complete sequencing of ape genomes DA Yoo, A Rhie, P Hebbar, F Antonacci, GA Logsdon, SJ Solar, D Antipov, ... bioRxiv, 2024.07. 31.605654, 2024 | 3 | 2024 |
Ribosomal profiling of human endogenous retroviruses in healthy tissues N Dopkins, B Singh, S Michael, P Zhang, JL Marston, T Fei, M Singh, ... BMC genomics 25 (1), 5, 2024 | 2 | 2024 |
Investigating the landscape of transposable elements in extrachromosomal circular DNA and in plant genome assembly using long-read sequencing P Zhang Université de Montpellier, 2022 | | 2022 |