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Panpan Zhang
Panpan Zhang
Verified email at cornell.edu
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Year
ecc_finder: a robust and accurate tool for detecting extrachromosomal circular DNA from sequencing data
P Zhang, H Peng, C Llauro, E Bucher, M Mirouze
Frontiers in plant science 12, 743742, 2021
412021
Large tandem duplications affect gene expression, 3D organization, and plant–pathogen response
A Picart-Picolo, S Grob, N Picault, M Franek, C Llauro, T Halter, TR Maier, ...
Genome research 30 (11), 1583-1592, 2020
362020
Arabidopsis MLO2 is a negative regulator of sensitivity to extracellular reactive oxygen species
F Cui, H Wu, O Safronov, P Zhang, R Kumar, H Kollist, J Salojärvi, ...
Plant, Cell & Environment 41 (4), 782-796, 2018
272018
Chromosome‐level Thlaspi arvense genome provides new tools for translational research and for a newly domesticated cash cover crop of the cooler climates
A Nunn, I Rodríguez‐Arévalo, Z Tandukar, K Frels, A Contreras‐Garrido, ...
Plant biotechnology journal 20 (5), 944-963, 2022
262022
Extrachromosomal circular DNA and structural variants highlight genome instability in Arabidopsis epigenetic mutants
P Zhang, A Mbodj, A Soundiramourtty, C Llauro, A Ghesquière, M Ingouff, ...
Nature communications 14 (1), 5236, 2023
152023
Identification of extrachromosomal circular forms of active transposable elements using mobilome-seq
S Lanciano, P Zhang, C Llauro, M Mirouze
Plant transposable elements: methods and protocols, 87-93, 2021
152021
Complete sequencing of ape genomes
DA Yoo, A Rhie, P Hebbar, F Antonacci, GA Logsdon, SJ Solar, D Antipov, ...
bioRxiv, 2024.07. 31.605654, 2024
32024
Ribosomal profiling of human endogenous retroviruses in healthy tissues
N Dopkins, B Singh, S Michael, P Zhang, JL Marston, T Fei, M Singh, ...
BMC genomics 25 (1), 5, 2024
22024
Investigating the landscape of transposable elements in extrachromosomal circular DNA and in plant genome assembly using long-read sequencing
P Zhang
Université de Montpellier, 2022
2022
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