Articles with public access mandates - Stephen D LarsonLearn more
Not available anywhere: 1
Maturation of neuroscience information framework: an ontology driven information system for neuroscience
FT Imam, S Larson, A Bandrowski, JS Grethe, A Gupta, ME Martone
Formal Ontology in Information Systems, 15-28, 2012
Mandates: US National Institutes of Health
Available somewhere: 19
The NIFSTD and BIRNLex vocabularies: building comprehensive ontologies for neuroscience
WJ Bug, GA Ascoli, JS Grethe, A Gupta, C Fennema-Notestine, AR Laird, ...
Neuroinformatics 6, 175-194, 2008
Mandates: US National Institutes of Health
OpenWorm: an open-science approach to modeling Caenorhabditis elegans
B Szigeti, P Gleeson, M Vella, S Khayrulin, A Palyanov, J Hokanson, ...
Frontiers in computational neuroscience 8, 137, 2014
Mandates: UK Biotechnology and Biological Sciences Research Council, UK Engineering …
OpenWorm: overview and recent advances in integrative biological simulation of Caenorhabditis elegans
GP Sarma, CW Lee, T Portegys, V Ghayoomie, T Jacobs, B Alicea, ...
Philosophical Transactions of the Royal Society B 373 (1758), 20170382, 2018
Mandates: US National Institutes of Health, Wellcome Trust
Open source brain: a collaborative resource for visualizing, analyzing, simulating, and developing standardized models of neurons and circuits
P Gleeson, M Cantarelli, B Marin, A Quintana, M Earnshaw, S Sadeh, ...
Neuron 103 (3), 395-411. e5, 2019
Mandates: US National Science Foundation, US National Institutes of Health, UK …
Ontologies for neuroscience: what are they and what are they good for?
SD Larson, ME Martone
Frontiers in neuroscience 3, 390, 2009
Mandates: US National Institutes of Health
Development and use of ontologies inside the neuroscience information framework: a practical approach
FT Imam, SD Larson, A Bandrowski, JS Grethe, A Gupta, ME Martone
Frontiers in genetics 3, 111, 2012
Mandates: US National Institutes of Health
c302: a multiscale framework for modelling the nervous system of Caenorhabditis elegans
P Gleeson, D Lung, R Grosu, R Hasani, SD Larson
Philosophical Transactions of the Royal Society B: Biological Sciences 373 …, 2018
Mandates: Wellcome Trust
Unit testing, model validation, and biological simulation
GP Sarma, TW Jacobs, MD Watts, SV Ghayoomie, SD Larson, RC Gerkin
F1000Research 5, 2016
Mandates: US National Institutes of Health
A survey of the neuroscience resource landscape: perspectives from the neuroscience information framework
J Cachat, A Bandrowski, JS Grethe, A Gupta, V Astakhov, F Imam, ...
International review of neurobiology 103, 39-68, 2012
Mandates: US National Institutes of Health
Microengineered 3D collagen gels with independently tunable fiber anisotropy and directionality
A Ahmed, IM Joshi, S Larson, M Mansouri, S Gholizadeh, Z Allahyari, ...
Advanced materials technologies 6 (4), 2001186, 2021
Mandates: US National Institutes of Health
Arabidopsis bioinformatics resources: The current state, challenges, and priorities for the future
International Arabidopsis Informatics Consortium, C Doherty, J Friesner, ...
Plant Direct 3 (1), e00109, 2019
Mandates: US National Science Foundation, UK Biotechnology and Biological Sciences …
A Trypanosoma brucei ORFeome-based gain-of-function library identifies genes that promote survival during melarsoprol treatment
MK Carter, S Gomez, S Gritz, S Larson, E Silva-Herzog, HS Kim, D Schulz, ...
Msphere 5 (5), 10.1128/msphere. 00769-20, 2020
Mandates: US National Institutes of Health
Connectome to behaviour: modelling Caenorhabditis elegans at cellular resolution
SD Larson, P Gleeson, AEX Brown
Philosophical Transactions of the Royal Society B: Biological Sciences 373 …, 2018
Mandates: Wellcome Trust
Computational Neuroscience Ontology: a new tool to provide semantic meaning to your models
Y Le Franc, AP Davison, P Gleeson, FT Imam, B Kriener, SD Larson, ...
BMC Neuroscience 13, 1-2, 2012
Mandates: Research Foundation (Flanders)
NIFSTD and NeuroLex: Comprehensive Neuroscience Ontology Development Based on Multiple Biomedical Ontologies and Community Involvement.
FT Imam, SD Larson, JS Grethe, A Gupta, AE Bandrowski, ME Martone
ICBO, 2011
Mandates: US National Institutes of Health
Effects of trypanocidal drugs on DNA synthesis: new insights into melarsoprol growth inhibition
S Larson, MK Carter, G Hovel-Miner
Parasitology 148 (10), 1143-1150, 2021
Mandates: US National Institutes of Health
26th annual computational neuroscience meeting (CNS* 2017): part 1
S Denham, P Poirazi, E De Schutter, K Friston, HK Chan, T Nowotny, ...
BMC Neuroscience 18, 1-14, 2017
Mandates: German Research Foundation, Federal Ministry of Education and Research …
Microengineered three-dimensional collagen fiber landscapes with independently tunable anisotropy and directionality
A Ahmed, IM Joshi, M Mansouri, S Larson, S Gholizadeh, Z Allahyari, ...
bioRxiv, 2020.06. 12.148346, 2020
Mandates: US National Institutes of Health
An ontology-based approach to linking model organisms and resources to human diseases
CJ Mungall, D Anderson, A Bandrowski, A Chatyr-Aryamontri, K Cheng, ...
International Conference on Biomedical Ontology, 2011
Mandates: US National Institutes of Health
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