| Inferring landscape effects on gene flow: a new model selection framework AJ Shirk, DO Wallin, SA Cushman, CG Rice, KI Warheit Molecular ecology 19 (17), 3603-3619, 2010 | 332 | 2010 |
| Multiple major increases and decreases in mitochondrial substitution rates in the plant family Geraniaceae CL Parkinson, JP Mower, YL Qiu, AJ Shirk, K Song, ND Young, ... BMC evolutionary biology 5, 1-12, 2005 | 177 | 2005 |
| Re-evaluating causal modeling with Mantel tests in landscape genetics SA Cushman, TN Wasserman, EL Landguth, AJ Shirk Diversity 5 (1), 51-72, 2013 | 165 | 2013 |
| A comparison of individual‐based genetic distance metrics for landscape genetics AJ Shirk, EL Landguth, SA Cushman Molecular Ecology Resources 17 (6), 1308-1317, 2017 | 146 | 2017 |
| Separating the effects of habitat area, fragmentation and matrix resistance on genetic differentiation in complex landscapes SA Cushman, A Shirk, EL Landguth Landscape ecology 27, 369-380, 2012 | 144 | 2012 |
| A comparison of regression methods for model selection in individual‐based landscape genetic analysis AJ Shirk, EL Landguth, SA Cushman Molecular ecology resources 18 (1), 55-67, 2018 | 143 | 2018 |
| Landscape genetics and limiting factors SA Cushman, AJ Shirk, EL Landguth Conservation Genetics 14, 263-274, 2013 | 115 | 2013 |
| Southwestern white pine (Pinus strobiformis) species distribution models project a large range shift and contraction due to regional climatic changes AJ Shirk, SA Cushman, KM Waring, CA Wehenkel, A Leal-Sáenz, ... Forest Ecology and Management 411, 176-186, 2018 | 95 | 2018 |
| Spatiotemporal variation in resource selection: insights from the American marten (Martes americana) AJ Shirk, MG Raphael, SA Cushman Ecological Applications 24 (6), 1434-1444, 2014 | 80 | 2014 |
| Population connectivity and genetic diversity of American marten (Martes americana) in the United States northern Rocky Mountains in a climate change context TN Wasserman, SA Cushman, JS Littell, AJ Shirk, EL Landguth Conservation Genetics 14, 529-541, 2013 | 72 | 2013 |
| sGD: software for estimating spatially explicit indices of genetic diversity AJ Shirk, SA Cushman Molecular Ecology Resources 11 (5), 922-934, 2011 | 54 | 2011 |
| Spatially-explicit estimation of Wright's neighborhood size in continuous populations AJ Shirk, SA Cushman Frontiers in Ecology and Evolution 2, 62, 2014 | 46 | 2014 |
| Simulating pattern‐process relationships to validate landscape genetic models AJ Shirk, SA Cushman, EL Landguth International Journal of Ecology 2012 (1), 539109, 2012 | 43 | 2012 |
| Empirical validation of landscape resistance models: insights from the Greater Sage-Grouse (Centrocercus urophasianus) AJ Shirk, MA Schroeder, LA Robb, SA Cushman Landscape Ecology 30, 1837-1850, 2015 | 42 | 2015 |
| Habitat associations of marbled murrelets during the nesting season in nearshore waters along the Washington to California coast MG Raphael, AJ Shirk, GA Falxa, SF Pearson Journal of Marine Systems 146, 17-25, 2015 | 30 | 2015 |
| Gnarly landscape utilities: resistance and habitat calculator user guide BH McRae, A Shirk, J Platt The Nature Conservancy, Fort Collins, 2013 | 30 | 2013 |
| Scale dependency of American marten (Martes americana) habitat relations AJ Shirk, TN Wasserman, SA Cushman, MG Raphael Biology and conservation of martens, sables, and fishers: a new synthesis (K …, 2012 | 29 | 2012 |
| Modelling multilocus selection in an individual‐based, spatially‐explicit landscape genetics framework EL Landguth, BR Forester, AJ Eckert, AJ Shirk, M Menon, A Whipple, ... Molecular ecology resources 20 (2), 605-615, 2020 | 19 | 2020 |
| The least cost path from landscape genetics to landscape genomics: challenges and opportunities to explore NGS data in a spatially explicit context SA Cushman, AJ Shirk, GT Howe, MA Murphy, RJ Dyer, S Joost Frontiers in genetics 9, 215, 2018 | 17 | 2018 |
| Gnarly landscape utilities: Core mapper user guide AJ Shirk, BH McRae The Nature Conservancy: Fort Collins, CO, USA, 2013 | 16 | 2013 |
