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Ryan McClure
Ryan McClure
Verified email at pnnl.gov
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Cited by
Cited by
Year
Microbiome definition re-visited: old concepts and new challenges
G Berg, D Rybakova, D Fischer, T Cernava, MCC Vergès, T Charles, ...
Microbiome 8, 1-22, 2020
17632020
Computational analysis of bacterial RNA-Seq data
R McClure, D Balasubramanian, Y Sun, M Bobrovskyy, P Sumby, ...
Nucleic acids research 41 (14), e140-e140, 2013
6612013
TLR-dependent human mucosal epithelial cell responses to microbial pathogens
R McClure, P Massari
Frontiers in immunology 5, 386, 2014
3562014
Soil microbiomes under climate change and implications for carbon cycling
D Naylor, N Sadler, A Bhattacharjee, EB Graham, CR Anderton, ...
Annual Review of Environment and Resources 45 (1), 29-59, 2020
2052020
Microbiome definition re-visited: old concepts and new challenges. Microbiome 8: 103
G Berg, D Rybakova, D Fischer, T Cernava, MCC Vergès, T Charles, ...
Epub 2020/07/02. https://doi. org/10.1186/s40168-020-00875-0. PubMed PMID …, 2020
1822020
Trends in microbial community composition and function by soil depth
D Naylor, R McClure, J Jansson
Microorganisms 10 (3), 540, 2022
972022
Selection, succession, and stabilization of soil microbial consortia
EK Zegeye, CJ Brislawn, Y Farris, SJ Fansler, KS Hofmockel, JK Jansson, ...
Msystems 4 (4), 10.1128/msystems. 00055-19, 2019
632019
The gonococcal transcriptome during infection of the lower genital tract in women
R McClure, K Nudel, P Massari, B Tjaden, X Su, PA Rice, CA Genco
PloS one 10 (8), e0133982, 2015
632015
Coupling genome-wide transcriptomics and developmental toxicity profiles in zebrafish to characterize polycyclic aromatic hydrocarbon (PAH) hazard
P Shankar, MC Geier, L Truong, RS McClure, P Pande, KM Waters, ...
International journal of molecular sciences 20 (10), 2570, 2019
572019
Development of microbiome biobanks–challenges and opportunities
MJ Ryan, M Schloter, G Berg, T Kostic, LL Kinkel, K Eversole, JA Macklin, ...
Trends in Microbiology 29 (2), 89-92, 2021
532021
Role of Hfq in iron-dependent and -independent gene regulation in Neisseria meningitidis
JR Mellin, R McClure, D Lopez, O Green, B Reinhard, C Genco
Microbiology 156 (8), 2316-2326, 2010
532010
Unlocking the constraints of cyanobacterial productivity: acclimations enabling ultrafast growth
HC Bernstein, RS McClure, EA Hill, LM Markillie, WB Chrisler, MF Romine, ...
MBio 7 (4), 10.1128/mbio. 00949-16, 2016
472016
Soil microbiome engineering for sustainability in a changing environment
JK Jansson, R McClure, RG Egbert
Nature Biotechnology 41 (12), 1716-1728, 2023
402023
Transcriptome analysis of Neisseria gonorrhoeae during natural infection reveals differential expression of antibiotic resistance determinants between men and women
K Nudel, R McClure, M Moreau, E Briars, AJ Abrams, B Tjaden, XH Su, ...
Msphere 3 (3), 10.1128/mspheredirect. 00312-18, 2018
34*2018
Characterization of the Neisseria gonorrhoeae iron and Fur regulatory network
C Yu, R McClure, K Nudel, N Daou, CA Genco
Journal of bacteriology 198 (16), 2180-2191, 2016
322016
Phenotypic responses to interspecies competition and commensalism in a naturally-derived microbial co-culture
N Khan, Y Maezato, RS McClure, CJ Brislawn, JM Mobberley, N Isern, ...
Scientific reports 8 (1), 297, 2018
312018
Network analysis of transcriptomics expands regulatory landscapes in Synechococcus sp. PCC 7002
RS McClure, CC Overall, JE McDermott, EA Hill, LM Markillie, LA McCue, ...
Nucleic acids research 44 (18), 8810-8825, 2016
292016
Identification of sRNAs expressed by the human pathogen Neisseria gonorrhoeae under disparate growth conditions
R McClure, B Tjaden, C Genco
Frontiers in microbiology 5, 456, 2014
292014
Development and analysis of a stable, reduced complexity model soil microbiome
R McClure, D Naylor, Y Farris, M Davison, SJ Fansler, KS Hofmockel, ...
Frontiers in Microbiology 11, 1987, 2020
282020
Deconstructing the soil microbiome into reduced-complexity functional modules
D Naylor, S Fansler, C Brislawn, WC Nelson, KS Hofmockel, JK Jansson, ...
MBio 11 (4), 10.1128/mbio. 01349-20, 2020
282020
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