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Anton Goloborodko
Anton Goloborodko
IMBA, Vienna Biocenter
Verified email at imba.oeaw.ac.at - Homepage
Title
Cited by
Cited by
Year
Formation of chromosomal domains by loop extrusion
G Fudenberg, M Imakaev, C Lu, A Goloborodko, N Abdennur, LA Mirny
Cell reports 15 (9), 2038-2049, 2016
18132016
Targeted degradation of CTCF decouples local insulation of chromosome domains from genomic compartmentalization
EP Nora, A Goloborodko, AL Valton, JH Gibcus, A Uebersohn, ...
Cell 169 (5), 930-944. e22, 2017
16862017
Iterative correction of Hi-C data reveals hallmarks of chromosome organization
M Imakaev, G Fudenberg, RP McCord, N Naumova, AA Goloborodko, ...
Nature Methods 9 (10), 999-1003, 2012
13922012
Two independent modes of chromatin organization revealed by cohesin removal
W Schwarzer, N Abdennur, A Goloborodko, A Pekowska, G Fudenberg, ...
Nature 551, 51–56, 2017
11112017
A pathway for mitotic chromosome formation
JH Gibcus, K Samejima, A Goloborodko, I Samejima, N Naumova, ...
Science 359 (6376), eaao6135, 2018
6832018
Hematopoietic stem cells are the major source of multilineage hematopoiesis in adult animals
CM Sawai, S Babovic, S Upadhaya, DJHF Knapp, Y Lavin, CM Lau, ...
Immunity 45 (3), 597-609, 2016
4242016
Chromosome compaction by active loop extrusion
A Goloborodko, JF Marko, LA Mirny
Biophysical journal 110 (10), 2162-2168, 2016
3132016
Compaction and segregation of sister chromatids via active loop extrusion
A Goloborodko, MV Imakaev, JF Marko, L Mirny
Elife 5, e14864, 2016
2962016
Emerging evidence of chromosome folding by loop extrusion
G Fudenberg, N Abdennur, M Imakaev, A Goloborodko, LA Mirny
Cold Spring Harbor symposia on quantitative biology 82, 45-55, 2017
2852017
Micro-C XL: assaying chromosome conformation from the nucleosome to the entire genome
THS Hsieh, G Fudenberg, A Goloborodko, OJ Rando
Nature methods 13 (12), 1009-1011, 2016
1852016
Pyteomics—a Python framework for exploratory data analysis and rapid software prototyping in proteomics
AA Goloborodko, LI Levitsky, MV Ivanov, MV Gorshkov
Journal of The American Society for Mass Spectrometry 24 (2), 301-304, 2013
1822013
SMC complexes differentially compact mitotic chromosomes according to genomic context
SA Schalbetter, A Goloborodko, G Fudenberg, JM Belton, C Miles, M Yu, ...
Nature cell biology 19 (9), 1071-1080, 2017
1322017
Conformation of sister chromatids in the replicated human genome
M Mitter, C Gasser, Z Takacs, CCH Langer, W Tang, G Jessberger, ...
Nature 586 (7827), 139-144, 2020
752020
Sequence scrambling in shotgun proteomics is negligible
AA Goloborodko, MV Gorshkov, DM Good, RA Zubarev
Journal of the American Society for Mass Spectrometry, 1-4, 2011
702011
Highly structured homolog pairing reflects functional organization of the Drosophila genome
J AlHaj Abed, J Erceg, A Goloborodko, SC Nguyen, RB McCole, W Saylor, ...
Nature communications 10 (1), 4485, 2019
672019
The genome-wide multi-layered architecture of chromosome pairing in early Drosophila embryos
J Erceg, J AlHaj Abed, A Goloborodko, BR Lajoie, G Fudenberg, ...
Nature communications 10 (1), 4486, 2019
552019
Formation of chromosomal domains by loop extrusion. Cell Rep 15: 2038–2049
G Fudenberg, M Imakaev, C Lu, A Goloborodko, N Abdennur, LA Mirny
502016
Cooltools: Enabling high-resolution Hi-C analysis in Python
Open2C, N Abdennur, S Abraham, G Fudenberg, IM Flyamer, ...
PLOS Computational Biology 20 (5), e1012067, 2024
452024
Pairtools: from sequencing data to chromosome contacts
Open2C, N Abdennur, G Fudenberg, IM Flyamer, AA Galitsyna, ...
PLOS Computational Biology 20 (5), e1012164, 2024
402024
Retention time prediction using the model of liquid chromatography of biomacromolecules at critical conditions in LC‐MS phosphopeptide analysis
TY Perlova, AA Goloborodko, Y Margolin, ML Pridatchenko, IA Tarasova, ...
Proteomics 10 (19), 3458-3468, 2010
382010
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