Articles with public access mandates - Matthew E RitchieLearn more
Not available anywhere: 5
Identification of quiescent and spatially restricted mammary stem cells that are hormone responsive
NY Fu, AC Rios, B Pal, CW Law, P Jamieson, R Liu, F Vaillant, F Jackling, ...
Nature cell biology 19 (3), 164-176, 2017
Mandates: National Health and Medical Research Council, Australia
Transcriptional profiling of individual airway projecting vagal sensory neurons
SB Mazzone, L Tian, AAK Moe, MW Trewella, ME Ritchie, AE McGovern
Molecular Neurobiology 57 (2), 949-963, 2020
Mandates: National Health and Medical Research Council, Australia
Interferon-gamma released from omental adipose tissue of insulin-resistant humans alters adipocyte phenotype and impairs response to insulin and adiponectin release
JM Wentworth, JG Zhang, E Bandala-Sanchez, G Naselli, R Liu, M Ritchie, ...
International Journal of Obesity 41 (12), 1782-1789, 2017
Mandates: National Health and Medical Research Council, Australia
High-LET radiation increases tumor progression in a K-Ras-driven model of lung adenocarcinoma
ML Asselin-Labat, R Rampersad, X Xu, ME Ritchie, J Michalski, L Huang, ...
Radiation research 188 (5), 642-650, 2017
Mandates: US National Aeronautics and Space Administration
A functional genetic screen identifies aurora kinase b as an essential regulator of Sox9-positive mouse embryonic lung progenitor cells
C Ah-Cann, VC Wimmer, CE Weeden, C Marceaux, CW Law, L Galvis, ...
Development 148 (13), dev199543, 2021
Mandates: National Health and Medical Research Council, Australia
Available somewhere: 118
limma powers differential expression analyses for RNA-sequencing and microarray studies
ME Ritchie, B Phipson, DI Wu, Y Hu, CW Law, W Shi, GK Smyth
Nucleic acids research 43 (7), e47-e47, 2015
Mandates: National Health and Medical Research Council, Australia
Apoptotic caspases suppress mtDNA-induced STING-mediated type I IFN production
MJ White, K McArthur, D Metcalf, RM Lane, JC Cambier, MJ Herold, ...
Cell 159 (7), 1549-1562, 2014
Mandates: US National Institutes of Health, National Health and Medical Research …
RNA-seq analysis is easy as 1-2-3 with limma, Glimma and edgeR
CW Law, M Alhamdoosh, S Su, X Dong, L Tian, GK Smyth, ME Ritchie
F1000Research 5, 2016
Mandates: National Health and Medical Research Council, Australia
beadarray: R classes and methods for Illumina bead-based data
MJ Dunning, ML Smith, ME Ritchie, S Tavaré
Bioinformatics 23 (16), 2183-2184, 2007
Mandates: Cancer Research UK
Why weight? Modelling sample and observational level variability improves power in RNA-seq analyses
R Liu, AZ Holik, S Su, N Jansz, K Chen, HS Leong, ME Blewitt, ...
Nucleic acids research 43 (15), e97-e97, 2015
Mandates: National Health and Medical Research Council, Australia
Targeting BCL-2 with the BH3 mimetic ABT-199 in estrogen receptor-positive breast cancer
F Vaillant, D Merino, L Lee, K Breslin, B Pal, ME Ritchie, GK Smyth, ...
Cancer cell 24 (1), 120-129, 2013
Mandates: National Health and Medical Research Council, Australia
Benchmarking single cell RNA-sequencing analysis pipelines using mixture control experiments
L Tian, X Dong, S Freytag, KA Lê Cao, S Su, A JalalAbadi, ...
Nature methods 16 (6), 479-487, 2019
Mandates: National Health and Medical Research Council, Australia, Chan Zuckerberg …
A re-annotation pipeline for Illumina BeadArrays: improving the interpretation of gene expression data
NL Barbosa-Morais, MJ Dunning, SA Samarajiwa, JFJ Darot, ME Ritchie, ...
Nucleic acids research 38 (3), e17-e17, 2010
Mandates: Cancer Research UK
Synergy between the KEAP1/NRF2 and PI3K pathways drives non-small-cell lung cancer with an altered immune microenvironment
SA Best, DP De Souza, A Kersbergen, AN Policheni, S Dayalan, D Tull, ...
Cell metabolism 27 (4), 935-943. e4, 2018
Mandates: National Health and Medical Research Council, Australia, Worldwide Cancer …
Combining multiple tools outperforms individual methods in gene set enrichment analyses
M Alhamdoosh, M Ng, NJ Wilson, JM Sheridan, H Huynh, MJ Wilson, ...
Bioinformatics 33 (3), 414-424, 2017
Mandates: National Health and Medical Research Council, Australia
Glimma: interactive graphics for gene expression analysis
S Su, CW Law, C Ah-Cann, ML Asselin-Labat, ME Blewitt, ME Ritchie
Bioinformatics 33 (13), 2050-2052, 2017
Mandates: National Health and Medical Research Council, Australia
The neuropeptide VIP confers anticipatory mucosal immunity by regulating ILC3 activity
C Seillet, K Luong, J Tellier, N Jacquelot, RD Shen, P Hickey, VC Wimmer, ...
Nature immunology 21 (2), 168-177, 2020
Mandates: National Health and Medical Research Council, Australia
Global changes in the mammary epigenome are induced by hormonal cues and coordinated by Ezh2
B Pal, T Bouras, W Shi, F Vaillant, JM Sheridan, N Fu, K Breslin, K Jiang, ...
Cell reports 3 (2), 411-426, 2013
Mandates: National Health and Medical Research Council, Australia
Integrative analysis of RUNX1 downstream pathways and target genes
J Michaud, KM Simpson, R Escher, K Buchet-Poyau, T Beissbarth, ...
BMC genomics 9, 1-17, 2008
Mandates: Swiss National Science Foundation, US National Institutes of Health
Deciphering the innate lymphoid cell transcriptional program
C Seillet, LA Mielke, DB Amann-Zalcenstein, S Su, J Gao, FF Almeida, ...
Cell reports 17 (2), 436-447, 2016
Mandates: Australian Research Council, National Health and Medical Research Council …
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