Articles with public access mandates - Michael GribskovLearn more
Not available anywhere: 1
Shiny-DEG: a web application to analyze and visualize differentially expressed genes in RNA-seq
S Wang, Y Zhang, C Hu, N Zhang, M Gribskov, H Yang
Interdisciplinary Sciences: Computational Life Sciences 12, 349-354, 2020
Mandates: National Natural Science Foundation of China
Available somewhere: 23
The Genome of Black Cottonwood, Populus trichocarpa (Torr. & Gray)
GA Tuskan, S Difazio, S Jansson, J Bohlmann, I Grigoriev, U Hellsten, ...
science 313 (5793), 1596-1604, 2006
Mandates: Genome Canada
The Selaginella genome identifies genetic changes associated with the evolution of vascular plants
JA Banks, T Nishiyama, M Hasebe, JL Bowman, M Gribskov, ...
science 332 (6032), 960-963, 2011
Mandates: US National Institutes of Health, German Research Foundation
A physical interaction network of dengue virus and human proteins
S Khadka, AD Vangeloff, C Zhang, P Siddavatam, NS Heaton, L Wang, ...
Molecular & Cellular Proteomics 10 (12), 2011
Mandates: US National Institutes of Health
Calcium-Dependent Protein Kinases from Arabidopsis Show Substrate Specificity Differences in an Analysis of 103 Substrates
A Curran, IF Chang, CL Chang, S Garg, RM Miguel, YD Barron, Y Li, ...
Frontiers in plant science 2, 36, 2011
Mandates: US National Institutes of Health
Comprehensive evaluation of de novo transcriptome assembly programs and their effects on differential gene expression analysis
S Wang, M Gribskov
Bioinformatics 33 (3), 327-333, 2017
Mandates: US National Science Foundation
AptRank: an adaptive PageRank model for protein function prediction on bi-relational graphs
B Jiang, K Kloster, DF Gleich, M Gribskov
Bioinformatics 33 (12), 1829-1836, 2017
Mandates: US National Science Foundation, US Department of Defense
Protein-protein interactions of tandem affinity purified protein kinases from rice
JS Rohila, M Chen, S Chen, J Chen, RL Cerny, C Dardick, P Canlas, ...
PloS one 4 (8), e6685, 2009
Mandates: US National Institutes of Health
Three genes define a bacterial-like arsenic tolerance mechanism in the arsenic hyperaccumulating fern Pteris vittata
C Cai, NA Lanman, KA Withers, AM DeLeon, Q Wu, M Gribskov, DE Salt, ...
Current Biology 29 (10), 1625-1633. e3, 2019
Mandates: US National Science Foundation
GenoBase: comprehensive resource database of Escherichia coli K-12
Y Otsuka, A Muto, R Takeuchi, C Okada, M Ishikawa, K Nakamura, ...
Nucleic acids research 43 (D1), D606-D617, 2015
Mandates: US National Institutes of Health
Bibliometric review of ATAC-Seq and its application in gene expression
L Luo, M Gribskov, S Wang
Briefings in Bioinformatics 23 (3), bbac061, 2022
Mandates: National Natural Science Foundation of China
The emerging world of wikis
JC Hu, R Aramayo, D Bolser, T Conway, CG Elsik, M Gribskov, T Kelder, ...
Science 320 (5881), 1289-1290, 2008
Mandates: US National Institutes of Health
Analysis of gap gene regulation in a 3D organism-scale model of the Drosophila melanogaster embryo
JB Hengenius, M Gribskov, AE Rundell, CC Fowlkes, DM Umulis
PLoS One 6 (11), e26797, 2011
Mandates: US National Institutes of Health
Differential gene expression in Varroa jacobsoni mites following a host shift to European honey bees (Apis mellifera)
GK Andino, M Gribskov, DL Anderson, JD Evans, GJ Hunt
BMC genomics 17, 1-12, 2016
Mandates: US Department of Agriculture
miRNA‐mediated macrophage behaviors responding to matrix stiffness and ox‐LDL
J Li, S Wang, Y Li, N Zhang, M Gribskov, X Zhang, M Lin, D Shao, ...
Journal of Cellular Physiology 235 (9), 6139-6153, 2020
Mandates: National Natural Science Foundation of China
Making models match measurements: model optimization for morphogen patterning networks
JB Hengenius, M Gribskov, AE Rundell, DM Umulis
Seminars in cell & developmental biology 35, 109-123, 2014
Mandates: US National Institutes of Health
Accurate classification of RNA structures using topological fingerprints
J Huang, K Li, M Gribskov
PLoS One 11 (10), e0164726, 2016
Mandates: US National Science Foundation
Chromatin-enriched RNAs mark active and repressive cis-regulation: An analysis of nuclear RNA-seq
X Sun, Z Wang, JM Hall, C Perez-Cervantes, AJ Ruthenburg, ...
PLoS computational biology 16 (2), e1007119, 2020
Mandates: US National Institutes of Health
The evolution history of Fe–S cluster A-type assembly protein reveals multiple gene duplication events and essential protein motifs
HM Lu, JD Li, YD Zhang, XL Lu, C Xu, Y Huang, M Gribskov
Genome Biology and Evolution 12 (3), 160-173, 2020
Mandates: National Natural Science Foundation of China
Transcriptome analysis identifies metallothionein as biomarkers to predict recurrence in hepatocellular cacinoma
S Wang, M Gribskov
Molecular Genetics & Genomic Medicine 7 (6), e693, 2019
Mandates: National Natural Science Foundation of China
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