Proteomic analysis reveals different composition of extracellular vesicles released by two Trypanosoma cruzi strains associated with their distinct interaction with … KS Ribeiro, CI Vasconcellos, RP Soares, MT Mendes, CC Ellis, ... Journal of extracellular vesicles 7 (1), 1463779, 2018 | 82 | 2018 |
Intratumoral CD56bright natural killer cells are associated with improved survival in bladder cancer N Mukherjee, N Ji, V Hurez, TJ Curiel, MO Montgomery, AJ Braun, ... Oncotarget 9 (92), 36492, 2018 | 60 | 2018 |
Meta-analysis of the Ralstonia solanacearum species complex (RSSC) based on comparative evolutionary genomics and reverse ecology P Sharma, MA Johnson, R Mazloom, C Allen, LS Heath, TM Lowe-Power, ... Microbial Genomics 8 (3), 000791, 2022 | 46 | 2022 |
Identifying optimal wavelengths as disease signatures using hyperspectral sensor and machine learning X Wei, MA Johnson, DB Langston Jr, HL Mehl, S Li Remote Sensing 13 (14), 2833, 2021 | 34 | 2021 |
Metagenomic sequencing for detection and identification of the boxwood blight pathogen Calonectria pseudonaviculata S Yang, MA Johnson, MA Hansen, E Bush, S Li, BA Vinatzer Scientific reports 12 (1), 1399, 2022 | 25 | 2022 |
Strain-level identification of bacterial tomato pathogens directly from metagenomic sequences ME Mechan Llontop, P Sharma, M Aguilera Flores, S Yang, J Pollok, ... Phytopathology 110 (4), 768-779, 2020 | 25 | 2020 |
Investigating plant disease outbreaks with long-read metagenomics: sensitive detection and highly resolved phylogenetic reconstruction applied to Xylella fastidiosa MA Johnson, H Liu, E Bush, P Sharma, S Yang, R Mazloom, LS Heath, ... Microbial genomics 8 (5), 000822, 2022 | 14 | 2022 |
XMAn v2—a database of Homo sapiens mutated peptides MA Flores, IM Lazar Bioinformatics 36 (4), 1311-1313, 2020 | 13 | 2020 |
The crystal structure and localization of Trypanosoma brucei invariant surface glycoproteins suggest a more permissive VSG coat in the tsetse-transmitted … A Casas-Sánchez, S Perally, R Ramaswamy, LR Haines, C Rose, ... bioRxiv, 477737, 2018 | 8 | 2018 |
Reference-free plant disease detection using machine learning and long-read metagenomic sequencing MA Johnson, BA Vinatzer, S Li Applied and Environmental Microbiology 89 (6), e00260-23, 2023 | 7 | 2023 |
Detection of soilborne disease utilizing sensor technologies: Lessons learned from studies on stem rot of peanut X Wei, M Aguilera, R Walcheck, D Tholl, S Li, DB Langston Jr, HL Mehl Plant Health Progress 22 (4), 436-444, 2021 | 7 | 2021 |
The Trypanosoma brucei MISP family of invariant proteins is co-expressed with BARP as triple helical bundle structures on the surface of salivary gland forms, but … A Casas-Sanchez, R Ramaswamy, S Perally, LR Haines, C Rose, ... PLoS Pathogens 19 (3), e1011269, 2023 | 4 | 2023 |
Computational tools for improved detection, identification, and classification of plant pathogens using genomics and metagenomics MA Johnson Virginia Tech, 2023 | 2 | 2023 |
A Survey of Xylella fastidiosa in the U.S. State of Virginia Reveals Wide Distribution of Both Subspecies fastidiosa and multiplex in Grapevine S Abdelrazek, E Bush, C Oliver, H Liu, P Sharma, MA Johnson, ... Phytopathology® 114 (1), 35-46, 2024 | 1 | 2024 |
Genomic delineation and description of species and within-species lineages in the genus Pantoea KC Crosby, M Rojas, P Sharma, MA Johnson, R Mazloom, BH Kvitko, ... Frontiers in Microbiology 14, 1254999, 2023 | 1 | 2023 |
Machine learning-based proteogenomic data modeling identifies circulating plasma biomarkers for early detection of lung cancer MA Johnson, L Hou, BE Huang, A Saadatpour, A Doostparast Torshizi medRxiv, 2024.07. 30.24311241, 2024 | | 2024 |
Population genomics of the Ralstonia solanacearum species complex and plant pathogen detection and identification using long-read metagenomics P Sharma, MA Johnson, R Mazloom, C Allen, LS Heath, TM Lowe-Power, ... Computational Tools for Improved Detection, Identification, and …, 2022 | | 2022 |
Reference free disease detection using machine learning and long read metagenomic sequencing MA Johnson, BA Vinatzer, S Li Computational Tools for Improved Detection, Identification, and …, 2022 | | 2022 |
Characterization of the Xylella fastidiosa population in Virginia using metagenomics S Abdelrazek, MA Johnson, P Sharma, H Liu, EA Bush, M Nita, ... PHYTOPATHOLOGY 112 (11), 80-81, 2022 | | 2022 |
Adaptation of the genus Pantoea (Gammaproteobacteria: Enterobacteriales: Erwiniaceae) to multiple hosts and environments K Crosby, P Sharma, M Aguilera, BA Vinatzer PHYTOPATHOLOGY 111 (10), 93-93, 2021 | | 2021 |