| Community-driven data analysis training for biology B Batut, S Hiltemann, A Bagnacani, D Baker, V Bhardwaj, C Blank, ... Cell systems 6 (6), 752-758. e1, 2018 | 182 | 2018 |
| The banana genome hub G Droc, D Lariviere, V Guignon, N Yahiaoui, D This, O Garsmeur, ... Database 2013, bat035, 2013 | 181 | 2013 |
| Galaxy Training: A powerful framework for teaching! S Hiltemann, H Rasche, S Gladman, HR Hotz, D Larivière, D Blankenberg, ... PLoS computational biology 19 (1), e1010752, 2023 | 37 | 2023 |
| No more business as usual: Agile and effective responses to emerging pathogen threats require open data and open analytics D Baker, M Van Den Beek, D Blankenberg, D Bouvier, J Chilton, N Coraor, ... PLoS pathogens 16 (8), e1008643, 2020 | 26 | 2020 |
| The South Green portal: a comprehensive resource for tropical and Mediterranean crop genomics V Guignon, Y Hueber, M Rouard, S Bocs, D Couvin, F De Lamotte, G Droc, ... | 19 | 2016 |
| Galaxy Training Network, Taylor J, Backofen R, Nekrutenko A, Grüning B B Batut, S Hiltemann, A Bagnacani, D Baker, V Bhardwaj, C Blank, ... Community-driven data analysis training for biology. Cell Syst 6 (6), 752-758, 2018 | 16 | 2018 |
| The banana genome hub Database G Droc, D Lariviere, V Guignon, N Yahiaoui, D This, O Garsmeur, ... Database, 2013 | 12 | 2013 |
| Scalable, accessible and reproducible reference genome assembly and evaluation in Galaxy D Larivière, L Abueg, N Brajuka, C Gallardo-Alba, B Grüning, BJ Ko, ... Nature biotechnology 42 (3), 367-370, 2024 | 7 | 2024 |
| Using Galaxy to Perform Large‐Scale Interactive Data Analyses—An Update A Ostrovsky, J Hillman‐Jackson, D Bouvier, D Clements, E Afgan, ... Current Protocols 1 (2), e31, 2021 | 6 | 2021 |
| Understanding trivial challenges of microbial genomics: An assembly example D Lariviere, H Mei, M Freeberg, J Taylor, A Nekrutenko bioRxiv, 347625, 2018 | 6 | 2018 |
| Community-Driven Data Analysis Training for Biology. Cell Syst. 2018; 6 (6): 752–758. e1 B Batut, S Hiltemann, A Bagnacani, D Baker, V Bhardwaj, C Blank, ... | 5 | |
| VGP assembly pipeline: Step by Step D Lariviere, A Ostrovsky, C Gallardo, A Syme, L Abueg, B Pickett, ... Galaxy Training Network, 2024 | 3 | 2024 |
| Reproducible and accessible analysis of transposon insertion sequencing in Galaxy for qualitative essentiality analyses D Larivière, L Wickham, K Keiler, A Nekrutenko, Galaxy Team BMC microbiology 21 (1), 168, 2021 | 3 | 2021 |
| RapGreen, an interactive software and web package to explore and analyze phylogenetic trees JF Dufayard, S Bocs, V Guignon, D Lariviere, A Louis, N Oubda, ... NAR Genomics and Bioinformatics 3 (3), lqab088, 2021 | 2 | 2021 |
| Essential genes detection with Transposon insertion sequencing D Lariviere, B Batut Galaxy Training Network, 2024 | 1 | 2024 |
| Methylation profiles at birth linked to early childhood obesity D Lariviere, SJC Craig, IM Paul, EE Hohman, JS Savage, RO Wright, ... Journal of Developmental Origins of Health and Disease 15, e7, 2024 | 1 | 2024 |
| Reproducible and accessible analysis of transposon insertion data at scale D Larivière, L Wickham, KC Keiler, A Nekrutenko bioRxiv, 2020.05. 19.105429, 2020 | 1 | 2020 |
| Unicycler Assembly A Nekrutenko, D Lariviere, S Gladman Galaxy Training Network, 2024 | | 2024 |
| Use Jupyter notebooks in Galaxy D Lariviere Galaxy Training Network, 2024 | | 2024 |
| RapGreen, a Java package to analyse, display and explore interactively phylogenetic trees JF Dufayard, D Larivière, M Ruiz, F De Lamotte Guéry | | 2018 |
Jean-François DufayardChercheur en génomique comparative et phylogénie, CIRAD, MontpellierVerified email at cirad.fr
