Stéphane Hacquard

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Eric KemenUniversity of TuebingenVerified email at uni-tuebingen.de
Duplessis SébastienINRAE Research Director, Deputy head of ECODIV Division (CDA)Verified email at inrae.fr
Francis MartinINRAE, Tree-Microbes Interactions DptVerified email at inrae.fr
Matthew T. AglerPlant Microbiosis Lab, FSU Jena Dept. of Microbiology, Jena, GermanyVerified email at uni-jena.de
Stijn SpaepenInnovation Manager, KU LeuvenVerified email at kuleuven.be
Kohler AnnegretINRAE Université de Lorraine UMR 1136 « Interactions Arbres-Microorganismes »Verified email at inrae.fr
Pascal FreySenior Researcher, INRAE Nancy, Université de Lorraine, FranceVerified email at inrae.fr
Kei HirumaThe University of TokyoVerified email at g.ecc.u-tokyo.ac.jp
Ryohei Thomas NakanoDepartment of Biological Sciences, Faculty of Science, Hokkaido UniversityVerified email at sci.hokudai.ac.jp
Benjamin PetreUniversité de Lorraine - UMR IAMVerified email at univ-lorraine.fr
Emiel Ver Loren van ThemaatDSMVerified email at dsm.com
Alice Carolyn McHardyHelmholtz Centre for Infection Research, GermanyVerified email at helmholtz-hzi.de
Nina DombrowskiRoyal Netherlands Institute for Sea Research (NIOZ)Verified email at nioz.nl
Bernard HenrissatTechnical University of Denmark / King Abdulaziz University / CNRS MarseilleVerified email at univ-amu.fr
Ruth E. LeyDepartment of Microbiome Science, Max Planck Institute for Biology, TübingenVerified email at tuebingen.mpg.de
Antonio GonzálezProgrammer Analyst, UC San DiegoVerified email at ucsd.edu
Jeff DanglProfessor--HHMI and Dept of Biology; UNC-Chapel HillVerified email at email.unc.edu
David L. JolyAssociate Professor, Université de MonctonVerified email at umoncton.ca
Richard HamelinProfessorVerified email at ubc.ca
Arnaud HeckerUMR 1136 "Interactions Arbres-Microorganismes" - INRA/Université de LorraineVerified email at univ-lorraine.fr

Stéphane Hacquard

Research Group Leader, Max Planck Institute for Plant Breeding Research

Verified email at mpipz.mpg.de

Microbiology Fungi Plant-Microbe Interactions Genomics Microbiome


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Microbial interactions within the plant holobiont. MA Hassani, P Durán, S Hacquard Microbiome 6:58, 2018	1041	2018
Lifestyle transitions in plant pathogenic Colletotrichum fungi deciphered by genome and transcriptome analyses RJ O’Connell, MR Thon, S Hacquard, SG Amyotte, J Kleemann, ... Nature Genetics 44, 1060-1065, 2012	1035	2012
Obligate biotrophy features unraveled by the genomic analysis of rust fungi S Duplessis, CA Cuomo, A Aerts, E Tisserant, C Veneault-Fourrey, ... Proceedings of the National Academy of Sciences 108 (22), 9166–9171, 2011	791	2011
Microbial Interkingdom Interactions in Roots Promote Arabidopsis Survival P Duran, T Thiergart, R Garrido-Oter, M Agler, E Kemen, P Schulze-Lefert, ... Cell 175 (4), P973-983.e14, 2018	782	2018
Microbiota and Host Nutrition across Plant and Animal Kingdoms S Hacquard, R Garrido-Oter, A González, S Spaepen, G Ackermann, ... Cell Host & Microbe 17 (5), 603-616, 2015	717	2015
Root Endophyte Colletotrichum tofieldiae Confers Plant Fitness Benefits that Are Phosphate Status Dependent K Hiruma, N Gerlach, S Sacristán, RT Nakano, S Hacquard, B Kracher, ... Cell 165 (2), 464-74, 2016	591	2016
Bacterial–fungal interactions: ecology, mechanisms and challenges A Deveau, G Bonito, J Uehling, M Paoletti, M Becker, S Bindschedler, ... FEMS microbiology reviews 42 (3), 335-352, 2018	590	2018
Interplay between innate immunity and the plant microbiota S Hacquard, S Spaepen, R Garrido-Oter, P Schulze-Lefert Annual review of Phytopathology 55 (1), 565-589, 2017	475	2017
Sequential Delivery of Host-Induced Virulence Effectors by Appressoria and Intracellular Hyphae of the Phytopathogen Colletotrichum higginsianum J Kleemann, LJ Rincon-Rivera, H Takahara, U Neumann, ... PLoS Pathogens 4 (8), e1002643, 2012	394	2012
Microbiota-mediated disease resistance in plants N Vannier, M Agler, S Hacquard PLoS Pathogens 15 (6), e1007740, 2019	280	2019
Survival trade-offs in plant roots during colonization by closely related beneficial and pathogenic fungi S Hacquard, B Kracher, K Hiruma, PC Münch, R Garrido-Oter, MR Thon, ... Nature Communications 7, 11362, 2016	266	2016
Critical assessment of metagenome interpretation: the second round of challenges F Meyer, A Fritz, ZL Deng, D Koslicki, TR Lesker, A Gurevich, G Robertson, ... Nature methods 19 (4), 429-440, 2022	227	2022
Root microbiota assembly and adaptive differentiation among European Arabidopsis populations T Thiergart, P Durán, T Ellis, N Vannier, R Garrido-Oter, E Kemen, F Roux, ... Nature ecology & evolution 4 (1), 122-131, 2020	214	2020
A comprehensive analysis of genes encoding small secreted proteins identifies candidate effectors in Melampsora larici-populina (poplar leaf rust) S Hacquard, DL Joly, YC Lin, E Tisserant, N Feau, C Delaruelle, V Legue, ... Molecular Plant-Microbe Interactions 3 (25), 279-293, 2012	186	2012
Mosaic genome structure of the barley powdery mildew pathogen and conservation of transcriptional programs in divergent hosts S Hacquard, B Kracher, T Maekawa, S Vernaldi, P Schulze-Lefert, ... Proceedings of the National Academy of Sciences 110 (24), E2219-28, 2013	181	2013
Root microbiota dynamics of perennial Arabis alpina are dependent on soil residence time but independent of flowering time N Dombrowski, K Schlaeppi, MT Agler, S Hacquard, E Kemen, ... The ISME Journal 11 (1), 43-55, 2017	155	2017
Towards a holistic understanding of the beneficial interactions across the Populus microbiome S Hacquard, CW Schadt New Phytologist 205 (4), 1424-30, 2015	152	2015
Disentangling the factors shaping microbiota composition across the plant holobiont S Hacquard New Phytologist 209 (2), 454-457, 2016	135	2016
Colletotrichum higginsianum extracellular LysM proteins play dual roles in appressorial function and suppression of chitin-triggered plant immunity H Takahara, S Hacquard, A Kombrink, HB Hughes, V Halder, GP Robin, ... New Phytologist 211 (4), 1323-37, 2016	130	2016
A microbiota–root–shoot circuit favours Arabidopsis growth over defence under suboptimal light S Hou, T Thiergart, N Vannier, F Mesny, J Ziegler, B Pickel, S Hacquard Nature Plants 7 (8), 1078-1092, 2021	105	2021

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