| Community-led, integrated, reproducible multi-omics with anvi’o AM Eren, E Kiefl, A Shaiber, I Veseli, SE Miller, MS Schechter, I Fink, ... Nature microbiology 6 (1), 3-6, 2021 | 518 | 2021 |
| Functional and genetic markers of niche partitioning among enigmatic members of the human oral microbiome A Shaiber, AD Willis, TO Delmont, S Roux, LX Chen, AC Schmid, ... Genome biology 21, 1-35, 2020 | 157 | 2020 |
| Droplet-based high-throughput cultivation for accurate screening of antibiotic resistant gut microbes WJ Watterson, M Tanyeri, AR Watson, CM Cham, Y Shan, EB Chang, ... Elife 9, e56998, 2020 | 119 | 2020 |
| Community-led, integrated, reproducible multi-omics with anvi’o. Nat Microbiol 6: 3–6 AM Eren, E Kiefl, A Shaiber, I Veseli, SE Miller, MS Schechter, I Fink, ... | 92 | 2021 |
| B cell superantigens in the human intestinal microbiota JJ Bunker, C Drees, AR Watson, CH Plunkett, CR Nagler, O Schneewind, ... Science translational medicine 11 (507), eaau9356, 2019 | 85 | 2019 |
| Colonization of the live biotherapeutic product VE303 and modulation of the microbiota and metabolites in healthy volunteers M Dsouza, R Menon, E Crossette, SK Bhattarai, J Schneider, YG Kim, ... Cell Host & Microbe 30 (4), 583-598. e8, 2022 | 79 | 2022 |
| The Wolbachia mobilome in Culex pipiens includes a putative plasmid J Reveillaud, SR Bordenstein, C Cruaud, A Shaiber, ÖC Esen, M Weill, ... Nature communications 10 (1), 1051, 2019 | 47 | 2019 |
| Metabolic independence drives gut microbial colonization and resilience in health and disease AR Watson, J Füssel, I Veseli, JZ DeLongchamp, M Silva, F Trigodet, ... Genome Biology 24 (1), 78, 2023 | 35 | 2023 |
| Functional insights into the kelp microbiome from metagenome-assembled genomes BL Weigel, KK Miranda, EC Fogarty, AR Watson, CA Pfister Msystems 7 (3), e01422-21, 2022 | 35 | 2022 |
| Adaptive ecological processes and metabolic independence drive microbial colonization and resilience in the human gut AR Watson, J Füssel, I Veseli, JZ DeLongchamp, M Silva, F Trigodet, ... bioRxiv, 2021.03. 02.433653, 2021 | 18 | 2021 |
| Microbes with higher metabolic independence are enriched in human gut microbiomes under stress I Veseli, YT Chen, MS Schechter, C Vanni, EC Fogarty, AR Watson, ... bioRxiv, 2023.05. 10.540289, 2023 | 14 | 2023 |
| Community-led, integrated, reproducible multi-omics with anvi’o. Nat Microbiol. 2021; 6: 3–6 AM Eren, E Kiefl, A Shaiber, I Veseli, SE Miller, MS Schechter, I Fink, ... | 11 | |
| Transient suppression of bacterial populations associated with gut health is critical in success of exclusive enteral nutrition for children with Crohn’s disease J Runde, I Veseli, EC Fogarty, AR Watson, Q Clayssen, M Yosef, ... Journal of Crohn's and Colitis 17 (7), 1103-1113, 2023 | 5 | 2023 |
| High-throughput isolation and sorting of gut microbes reduce biases of traditional cultivation strategies WJ Watterson, M Tanyeri, AR Watson, CM Cham, Y Shan, EB Chang, ... bioRxiv, 759969, 2019 | 4 | 2019 |
| Faecal Microbiota Transplantation Engraftment After Budesonide or Placebo in Patients With Active Ulcerative Colitis Using Pre-selected Donors: A Randomized Pilot Study E van Lingen, S Nooij, EM Terveer, E Crossette, AL Prince, SK Bhattarai, ... Journal of Crohn's and Colitis, jjae043, 2024 | 1 | 2024 |
| Bacterial diversity and specific taxa are associated with decolonization of carbapenemase-producing enterobacterales after fecal microbiota transplantation B Davido, AR Watson, P de Truchis, G Galazzo, A Dinh, R Batista, ... Journal of Infection 89 (2), 106216, 2024 | | 2024 |
| 43 RECOVERY OF MICROBIOME FUNCTIONAL PATHWAYS INVOLVED IN STICKLAND FERMENTATION IN PATIENTS RECEIVING VE303, A DEFINED BACTERIAL CONSORTIUM FOR CLOSTRIDIOIDES DIFFICILE … EM Crossette, R Menon, A Watson, WA Chen, G Medlock, AL Prince, ... Gastroenterology 166 (5), S-17, 2024 | | 2024 |
| 2760. Fecal Microbiota Transplantation for Decolonization of Carbapenemase-Producing Enterobacterales B Davido, A Watson, P De Truchis, G Galazzo, A Dinh, R Batista, ... Open Forum Infectious Diseases 10 (Suppl 2), 2023 | | 2023 |
| 2521. VE707, a Defined Live Biotherapeutic Product for Prevention of Infection by Multidrug-Resistant Gram-Negative Bacteria G Medlock, C Felix, W Alsharif, L Cornacchione, M Schinn, A Watson, ... Open Forum Infectious Diseases 10 (Suppl 2), 2023 | | 2023 |
| Determinants of microbial colonization and resilience in the human gut AR Watson The University of Chicago, 2021 | | 2021 |