Articles with public access mandates - Vishy IyerLearn more
Available somewhere: 49
An integrated encyclopedia of DNA elements in the human genome
ENCODE Project Consortium
Nature 489 (7414), 57, 2012
Mandates: US National Institutes of Health
Identification and analysis of functional elements in 1% of the human genome by the ENCODE pilot project
Management Group Liefer Laura A. 51 Wetterstrand Kris A. 51 Good Peter J. 51 ...
nature 447 (7146), 799-816, 2007
Mandates: German Research Foundation
The accessible chromatin landscape of the human genome
RE Thurman, E Rynes, R Humbert, J Vierstra, MT Maurano, E Haugen, ...
Nature 489 (7414), 75-82, 2012
Mandates: US National Institutes of Health
ChIP-seq guidelines and practices of the ENCODE and modENCODE consortia
SG Landt, GK Marinov, A Kundaje, P Kheradpour, F Pauli, S Batzoglou, ...
Genome research 22 (9), 1813-1831, 2012
Mandates: US National Institutes of Health
A user's guide to the encyclopedia of DNA elements (ENCODE)
RM Myers, J Stamatoyannopoulos, M Snyder, I Dunham, RC Hardison, ...
PLoS biology 9 (4), 2011
Mandates: US National Institutes of Health
Open chromatin defined by DNaseI and FAIRE identifies regulatory elements that shape cell-type identity
L Song, Z Zhang, LL Grasfeder, AP Boyle, PG Giresi, BK Lee, ...
Genome research 21 (10), 1757-1767, 2011
Mandates: US National Institutes of Health
High-resolution genome-wide in vivo footprinting of diverse transcription factors in human cells
AP Boyle, L Song, BK Lee, D London, D Keefe, E Birney, VR Iyer, ...
Genome research 21 (3), 456-464, 2011
Mandates: US National Institutes of Health
Heritable individual-specific and allele-specific chromatin signatures in humans
R McDaniell, BK Lee, L Song, Z Liu, AP Boyle, MR Erdos, LJ Scott, ...
Science 328 (5975), 235-239, 2010
Mandates: US National Institutes of Health
Thermostable group II intron reverse transcriptase fusion proteins and their use in cDNA synthesis and next-generation RNA sequencing
S Mohr, E Ghanem, W Smith, D Sheeter, Y Qin, O King, D Polioudakis, ...
Rna 19 (7), 958-970, 2013
Mandates: US National Institutes of Health
Stem cell and neurogenic gene-expression profiles link prostate basal cells to aggressive prostate cancer
D Zhang, D Park, Y Zhong, Y Lu, K Rycaj, S Gong, X Chen, X Liu, ...
Nature communications 7 (1), 10798, 2016
Mandates: US National Institutes of Health
Stress-dependent dynamics of global chromatin remodeling in yeast: dual role for SWI/SNF in the heat shock stress response
S Shivaswamy, VR Iyer
Molecular and cellular biology 28 (7), 2221-2234, 2008
Mandates: Swiss National Science Foundation, US National Institutes of Health
Wide-ranging functions of E2F4 in transcriptional activation and repression revealed by genome-wide analysis
BK Lee, AA Bhinge, VR Iyer
Nucleic Acids Research 39 (9), 3558-3573, 2011
Mandates: US National Institutes of Health
Extensive evolutionary changes in regulatory element activity during human origins are associated with altered gene expression and positive selection
Y Shibata, NC Sheffield, O Fedrigo, CC Babbitt, M Wortham, AK Tewari, ...
PLoS genetics 8 (6), e1002789, 2012
Mandates: US National Institutes of Health
Widespread misinterpretable ChIP-seq bias in yeast
D Park, Y Lee, G Bhupindersingh, VR Iyer
PloS one 8 (12), e83506, 2013
Mandates: US National Institutes of Health
Cell-type specific and combinatorial usage of diverse transcription factors revealed by genome-wide binding studies in multiple human cells
BK Lee, AA Bhinge, A Battenhouse, RM McDaniell, Z Liu, L Song, Y Ni, ...
Genome research 22 (1), 9-24, 2012
Mandates: US National Institutes of Health
Synthetic evolutionary origin of a proofreading reverse transcriptase
JW Ellefson, J Gollihar, R Shroff, H Shivram, VR Iyer, AD Ellington
Science 352 (6293), 1590-1593, 2016
Mandates: US National Institutes of Health, US National Aeronautics and Space …
Genome-wide studies of CCCTC-binding factor (CTCF) and cohesin provide insight into chromatin structure and regulation
BK Lee, VR Iyer
Journal of Biological Chemistry 287 (37), 30906-30913, 2012
Mandates: US National Institutes of Health
Dendritic cell fate is determined by BCL11A
GC Ippolito, JD Dekker, YH Wang, BK Lee, AL Shaffer III, J Lin, JK Wall, ...
Proceedings of the National Academy of Sciences 111 (11), E998-E1006, 2014
Mandates: US National Institutes of Health
Simultaneous mapping of transcript ends at single-nucleotide resolution and identification of widespread promoter-associated non-coding RNA governed by TATA elements
D Park, AR Morris, A Battenhouse, VR Iyer
Nucleic acids research 42 (6), 3736-3749, 2014
Mandates: US National Institutes of Health
Global transcriptional profiling reveals distinct functions of thymic stromal subsets and age-related changes during thymic involution
S Ki, D Park, HJ Selden, J Seita, H Chung, J Kim, VR Iyer, LIR Ehrlich
Cell reports 9 (1), 402-415, 2014
Mandates: US National Institutes of Health
Publication and funding information is determined automatically by a computer program