Articles with public access mandates - Jan KomorowskiLearn more
Available somewhere: 55
Identification and analysis of functional elements in 1% of the human genome by the ENCODE pilot project
Management Group Liefer Laura A. 51 Wetterstrand Kris A. 51 Good Peter J. 51 ...
nature 447 (7146), 799-816, 2007
Mandates: German Research Foundation
Pan-cancer analysis of whole genomes
Nature 578 (7793), 82-93, 2020
Mandates: US National Institutes of Health, Cancer Research UK, UK Medical Research …
Analyses of non-coding somatic drivers in 2,658 cancer whole genomes
E Rheinbay, MM Nielsen, F Abascal, JA Wala, O Shapira, G Tiao, ...
Nature 578 (7793), 102-111, 2020
Mandates: US National Institutes of Health, Danish Council for Independent Research …
Characterization of novel and complex genomic aberrations in glioblastoma using a 32K BAC array
H Nord, C Hartmann, R Andersson, U Menzel, S Pfeifer, A Piotrowski, ...
Neuro-oncology 11 (6), 803-818, 2009
Mandates: German Research Foundation
A comprehensive analysis of the structure-function relationship in proteins based on local structure similarity
TR Hvidsten, A Lægreid, A Kryshtafovych, G Andersson, K Fidelis, ...
PloS one 4 (7), e6266, 2009
Mandates: US National Institutes of Health
Gis1 and Rph1 regulate glycerol and acetate metabolism in glucose depleted yeast cells
J Orzechowski Westholm, S Tronnersjö, N Nordberg, I Olsson, ...
PloS one 7 (2), e31577, 2012
Mandates: Swedish Research Council
Genomic characterization of relapsed acute myeloid leukemia reveals novel putative therapeutic targets
S Stratmann, SA Yones, M Mayrhofer, N Norgren, A Skaftason, J Sun, ...
Blood advances 5 (3), 900-912, 2021
Mandates: Knut and Alice Wallenberg Foundation, Swedish Research Council, National …
Cancer associated epigenetic transitions identified by genome-wide histone methylation binding profiles in human colorectal cancer samples and paired normal mucosa
S Enroth, A Rada-Iglesisas, R Andersson, O Wallerman, A Wanders, ...
BMC cancer 11, 1-13, 2011
Mandates: Swedish Research Council
A significant regulatory mutation burden at a high‐affinity position of the CTCF motif in gastrointestinal cancers
HM Umer, M Cavalli, MJ Dabrowski, K Diamanti, M Kruczyk, G Pan, ...
Human mutation 37 (9), 904-913, 2016
Mandates: Swedish Research Council
Combinations of histone modifications mark exon inclusion levels
S Enroth, S Bornelöv, C Wadelius, J Komorowski
PloS one 7 (1), e29911, 2012
Mandates: Swedish Research Council
Intra-and inter-individual metabolic profiling highlights carnitine and lysophosphatidylcholine pathways as key molecular defects in type 2 diabetes
K Diamanti, M Cavalli, G Pan, MJ Pereira, C Kumar, S Skrtic, M Grabherr, ...
Scientific reports 9 (1), 9653, 2019
Mandates: Swedish Research Council for Environment, Agricultural Sciences and Spatial …
Recurrent genomic alterations in benign and malignant pheochromocytomas and paragangliomas revealed by whole-genome array comparative genomic hybridization analysis
J Sandgren, T Diaz de Ståhl, R Andersson, U Menzel, A Piotrowski, ...
Endocrine-Related Cancer 17 (3), 561, 2010
Mandates: Swedish Research Council
Combined burden and functional impact tests for cancer driver discovery using DriverPower
S Shuai, S Gallinger, LD Stein
Nature communications 11 (1), 734, 2020
Mandates: US National Institutes of Health
Integrative epigenomic and genomic analysis of malignant pheochromocytoma
J Sandgren, R Andersson, A Rada-Iglesias, S Enroth, G Åkerström, ...
Experimental & molecular medicine 42 (7), 484-502, 2010
Mandates: Swedish Research Council
Different distribution of histone modifications in genes with unidirectional and bidirectional transcription and a role of CTCF and cohesin in directing transcription
S Bornelöv, J Komorowski, C Wadelius
BMC genomics 16, 1-13, 2015
Mandates: Swedish Research Council for Environment, Agricultural Sciences and Spatial …
Mapping chromatin accessibility and active regulatory elements reveals pathological mechanisms in human gliomas
K Stępniak, MA Machnicka, J Mieczkowski, A Macioszek, B Wojtaś, ...
Nature Communications 12 (1), 3621, 2021
Mandates: National Science Centre, Poland
A multi-omics approach to liver diseases: integration of single nuclei transcriptomics with proteomics and HiCap bulk data in human liver
M Cavalli, K Diamanti, G Pan, R Spalinskas, C Kumar, AS Deshmukh, ...
Omics: a journal of integrative biology 24 (4), 180-194, 2020
Mandates: Knut and Alice Wallenberg Foundation, Swedish Research Council
Allele specific chromatin signals, 3D interactions, and motif predictions for immune and B cell related diseases
M Cavalli, N Baltzer, HM Umer, J Grau, I Lemnian, G Pan, O Wallerman, ...
Scientific reports 9 (1), 2695, 2019
Mandates: German Research Foundation, Swedish Research Council
Macrophage-associated wound healing contributes to African green monkey SIV pathogenesis control
F Barrenas, K Raehtz, C Xu, L Law, RR Green, G Silvestri, SE Bosinger, ...
Nature communications 10 (1), 5101, 2019
Mandates: US National Institutes of Health, Swedish Research Council
Ciruvis: a web-based tool for rule networks and interaction detection using rule-based classifiers
S Bornelöv, S Marillet, J Komorowski
BMC bioinformatics 15, 1-12, 2014
Mandates: Swedish Research Council for Environment, Agricultural Sciences and Spatial …
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