Articles with public access mandates - Drena DobbsLearn more
Not available anywhere: 2
Molecular and biological characterization of equine infectious anemia virus Rev
S Carpenter, D Dobbs
Current HIV research 8 (1), 87-93, 2010
Mandates: US National Institutes of Health
Regulatory RNA: Session Introduction
D Dobbs, S Brenner, V Honavar, R Jernigan, A Laederach, Q Morris
Mandates: US National Institutes of Health
Available somewhere: 49
Rapid “open-source” engineering of customized zinc-finger nucleases for highly efficient gene modification
ML Maeder, S Thibodeau-Beganny, A Osiak, DA Wright, RM Anthony, ...
Molecular cell 31 (2), 294-301, 2008
Mandates: US National Institutes of Health
Predicting linear B‐cell epitopes using string kernels
Y EL‐Manzalawy, D Dobbs, V Honavar
Journal of Molecular Recognition: An Interdisciplinary Journal 21 (4), 243-255, 2008
Mandates: US National Institutes of Health
Selection-free zinc-finger-nuclease engineering by context-dependent assembly (CoDA)
JD Sander, EJ Dahlborg, MJ Goodwin, L Cade, F Zhang, D Cifuentes, ...
Nature methods 8 (1), 67-69, 2011
Mandates: US National Institutes of Health
Predicting RNA-protein interactions using only sequence information
UK Muppirala, VG Honavar, D Dobbs
BMC bioinformatics 12, 1-11, 2011
Mandates: US National Institutes of Health
High frequency targeted mutagenesis in Arabidopsis thaliana using zinc finger nucleases
F Zhang, ML Maeder, E Unger-Wallace, JP Hoshaw, D Reyon, ...
Proceedings of the National Academy of Sciences 107 (26), 12028-12033, 2010
Mandates: US National Institutes of Health
ZiFiT (Zinc Finger Targeter): an updated zinc finger engineering tool
JD Sander, ML Maeder, D Reyon, DF Voytas, JK Joung, D Dobbs
Nucleic acids research 38 (suppl_2), W462-W468, 2010
Mandates: US National Institutes of Health
Targeted mutagenesis of duplicated genes in soybean with zinc-finger nucleases
SJ Curtin, F Zhang, JD Sander, WJ Haun, C Starker, NJ Baltes, D Reyon, ...
Plant physiology 156 (2), 466-473, 2011
Mandates: US National Institutes of Health
Computational prediction of protein interfaces: A review of data driven methods
LC Xue, D Dobbs, AMJJ Bonvin, V Honavar
FEBS letters 589 (23), 3516-3526, 2015
Mandates: US National Institutes of Health
PRIDB: a protein–RNA interface database
BA Lewis, RR Walia, M Terribilini, J Ferguson, C Zheng, V Honavar, ...
Nucleic acids research 39 (suppl_1), D277-D282, 2010
Mandates: US National Institutes of Health
RNABindRPlus: a predictor that combines machine learning and sequence homology-based methods to improve the reliability of predicted RNA-binding residues in proteins
RR Walia, LC Xue, K Wilkins, Y El-Manzalawy, D Dobbs, V Honavar
PloS one 9 (5), e97725, 2014
Mandates: US National Institutes of Health
HomPPI: a class of sequence homology based protein-protein interface prediction methods
LC Xue, D Dobbs, V Honavar
BMC bioinformatics 12, 1-24, 2011
Mandates: US National Institutes of Health
Efficient targeted integration directed by short homology in zebrafish and mammalian cells
WA Wierson, JM Welker, MP Almeida, CM Mann, DA Webster, ME Torrie, ...
Elife 9, e53968, 2020
Mandates: US National Institutes of Health
Predicting protein-protein interface residues using local surface structural similarity
RA Jordan, Y El-Manzalawy, D Dobbs, V Honavar
BMC bioinformatics 13, 1-14, 2012
Mandates: US National Institutes of Health
Protein-RNA interface residue prediction using machine learning: an assessment of the state of the art
RR Walia, C Caragea, BA Lewis, F Towfic, M Terribilini, Y El-Manzalawy, ...
BMC bioinformatics 13, 1-20, 2012
Mandates: US National Institutes of Health
Zinc Finger Database (ZiFDB): a repository for information on C2H2 zinc fingers and engineered zinc-finger arrays
F Fu, JD Sander, M Maeder, S Thibodeau-Beganny, JK Joung, D Dobbs, ...
Nucleic acids research 37 (suppl_1), D279-D283, 2009
Mandates: US National Institutes of Health
Robust activation of microhomology-mediated end joining for precision gene editing applications
H Ata, TL Ekstrom, G Martínez-Gálvez, CM Mann, AV Dvornikov, ...
PLoS genetics 14 (9), e1007652, 2018
Mandates: US National Institutes of Health, American Heart Association
An affinity-based scoring scheme for predicting DNA-binding activities of modularly assembled zinc-finger proteins
JD Sander, P Zaback, JK Joung, DF Voytas, D Dobbs
Nucleic acids research 37 (2), 506-515, 2009
Mandates: US National Institutes of Health
On evaluating MHC-II binding peptide prediction methods
Y El-Manzalawy, D Dobbs, V Honavar
PloS one 3 (9), e3268, 2008
Mandates: US National Institutes of Health
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