Articles with public access mandates - sebastian doniachLearn more
Not available anywhere: 1
Predicting recurrence in clear cell renal cell carcinoma: Analysis of TCGA data using outlier analysis and generalized matrix LVQ
G Mukherjee, G Bhanot, K Raines, S Sastry, S Doniach, M Biehl
2016 IEEE Congress on Evolutionary Computation (CEC), 656-661, 2016
Mandates: US National Science Foundation, US National Institutes of Health
Available somewhere: 33
Understanding nucleic acid–ion interactions
J Lipfert, S Doniach, R Das, D Herschlag
Annual review of biochemistry 83 (1), 813-841, 2014
Mandates: US National Institutes of Health
Dependence of micelle size and shape on detergent alkyl chain length and head group
RC Oliver, J Lipfert, DA Fox, RH Lo, S Doniach, L Columbus
PloS one 8 (5), e62488, 2013
Mandates: US National Institutes of Health
The linac coherent light source single particle imaging road map
A Aquila, A Barty, C Bostedt, S Boutet, G Carini, D DePonte, P Drell, ...
Structural Dynamics 2 (4), 2015
Mandates: US Department of Energy, US National Institutes of Health, Swedish Research …
Salt dependence of the radius of gyration and flexibility of single-stranded DNA in solution probed by small-angle x-ray scattering
AYL Sim, J Lipfert, D Herschlag, S Doniach
Physical Review E—Statistical, Nonlinear, and Soft Matter Physics 86 (2 …, 2012
Mandates: US National Institutes of Health
Long single α-helical tail domains bridge the gap between structure and function of myosin VI
BJ Spink, S Sivaramakrishnan, J Lipfert, S Doniach, JA Spudich
Nature structural & molecular biology 15 (6), 591-597, 2008
Mandates: US National Institutes of Health
Dynamic charge interactions create surprising rigidity in the ER/K α-helical protein motif
S Sivaramakrishnan, BJ Spink, AYL Sim, S Doniach, JA Spudich
Proceedings of the National Academy of Sciences 105 (36), 13356-13361, 2008
Mandates: US National Institutes of Health
AquaSAXS: a web server for computation and fitting of SAXS profiles with non-uniformally hydrated atomic models
F Poitevin, H Orland, S Doniach, P Koehl, M Delarue
Nucleic acids research 39 (suppl_2), W184-W189, 2011
Mandates: US National Institutes of Health
Mixing and matching detergents for membrane protein NMR structure determination
L Columbus, J Lipfert, K Jambunathan, DA Fox, AYL Sim, S Doniach, ...
Biophysical Journal 96 (3), 195a, 2009
Mandates: US National Institutes of Health
A repulsive field: advances in the electrostatics of the ion atmosphere
VB Chu, Y Bai, J Lipfert, D Herschlag, S Doniach
Current opinion in chemical biology 12 (6), 619-625, 2008
Mandates: US National Institutes of Health
The complete VS ribozyme in solution studied by small-angle X-ray scattering
J Lipfert, J Ouellet, DG Norman, S Doniach, DMJ Lilley
Structure 16 (9), 1357-1367, 2008
Mandates: US National Institutes of Health, Cancer Research UK
ATP-independent reversal of a membrane protein aggregate by a chloroplast SRP subunit
P Jaru-Ampornpan, K Shen, VQ Lam, M Ali, S Doniach, TZ Jia, S Shan
Nature structural & molecular biology 17 (6), 696-702, 2010
Mandates: US National Institutes of Health
Critical assessment of nucleic acid electrostatics via experimental and computational investigation of an unfolded state ensemble
Y Bai, VB Chu, J Lipfert, VS Pande, D Herschlag, S Doniach
Journal of the American Chemical Society 130 (37), 12334-12341, 2008
Mandates: US National Institutes of Health
The ligand-free state of the TPP riboswitch: a partially folded RNA structure
M Ali, J Lipfert, S Seifert, D Herschlag, S Doniach
Journal of molecular biology 396 (1), 153-165, 2010
Mandates: US National Institutes of Health
Dissecting electrostatic screening, specific ion binding, and ligand binding in an energetic model for glycine riboswitch folding
J Lipfert, AYL Sim, D Herschlag, S Doniach
Rna 16 (4), 708-719, 2010
Mandates: US National Institutes of Health
Do conformational biases of simple helical junctions influence RNA folding stability and specificity?
VB Chu, J Lipfert, Y Bai, VS Pande, S Doniach, D Herschlag
RNA 15 (12), 2195-2205, 2009
Mandates: US National Institutes of Health
Combining single-molecule optical trapping and small-angle x-ray scattering measurements to compute the persistence length of a protein ER/K α-helix
S Sivaramakrishnan, J Sung, M Ali, S Doniach, H Flyvbjerg, JA Spudich
Biophysical journal 97 (11), 2993-2999, 2009
Mandates: US National Institutes of Health
Absolute intramolecular distance measurements with angstrom-resolution using anomalous small-angle X-ray scattering
T Zettl, RS Mathew, S Seifert, S Doniach, PAB Harbury, J Lipfert
Nano Letters 16 (9), 5353-5357, 2016
Mandates: US Department of Energy, US National Institutes of Health, German Research …
Electrostatics of nucleic acid folding under conformational constraint
PC Anthony, AYL Sim, VB Chu, S Doniach, SM Block, D Herschlag
Journal of the American Chemical Society 134 (10), 4607-4614, 2012
Mandates: US National Institutes of Health
Observation of correlated X-ray scattering at atomic resolution
D Mendez, TJ Lane, J Sung, J Sellberg, C Levard, H Watkins, AE Cohen, ...
Philosophical Transactions of the Royal Society B: Biological Sciences 369 …, 2014
Mandates: US National Institutes of Health
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