Articles with public access mandates - Sasha LevyLearn more
Available somewhere: 29
Quantitative evolutionary dynamics using high-resolution lineage tracking
SF Levy, JR Blundell, S Venkataram, DA Petrov, DS Fisher, G Sherlock
Nature 519 (7542), 181-186, 2015
Mandates: US National Institutes of Health
Bet hedging in yeast by heterogeneous, age-correlated expression of a stress protectant
SF Levy, N Ziv, ML Siegal
PLoS biology 10 (5), e1001325, 2012
Mandates: US National Institutes of Health
Network hubs buffer environmental variation in Saccharomyces cerevisiae
SF Levy, ML Siegal
PLoS biology 6 (11), e264, 2008
Mandates: US National Institutes of Health
Development of a comprehensive genotype-to-fitness map of adaptation-driving mutations in yeast
S Venkataram, B Dunn, Y Li, A Agarwala, J Chang, ER Ebel, ...
Cell 166 (6), 1585-1596. e22, 2016
Mandates: US National Science Foundation, US National Institutes of Health
High-resolution lineage tracking reveals travelling wave of adaptation in laboratory yeast
AN Nguyen Ba, I Cvijović, JI Rojas Echenique, KR Lawrence, ...
Nature 575 (7783), 494-499, 2019
Mandates: US National Science Foundation, US Department of Energy, US National …
Gene architectures that minimize cost of gene expression
I Frumkin, D Schirman, A Rotman, F Li, L Zahavi, E Mordret, O Asraf, S Wu, ...
Molecular cell 65 (1), 142-153, 2017
Mandates: US National Institutes of Health, Federal Ministry of Education and Research …
Beyond genome sequencing: lineage tracking with barcodes to study the dynamics of evolution, infection, and cancer
JR Blundell, SF Levy
Genomics 104 (6), 417-430, 2014
Mandates: US National Institutes of Health
Single-cell copy number variant detection reveals the dynamics and diversity of adaptation
S Lauer, G Avecilla, P Spealman, G Sethia, N Brandt, SF Levy, ...
PLoS Biology 16 (12), e3000069, 2018
Mandates: US National Science Foundation, US National Institutes of Health
Bartender: a fast and accurate clustering algorithm to count barcode reads
L Zhao, Z Liu, SF Levy, S Wu
Bioinformatics 34 (5), 739-747, 2018
Mandates: US National Institutes of Health
The dynamics of adaptive genetic diversity during the early stages of clonal evolution
JR Blundell, K Schwartz, D Francois, DS Fisher, G Sherlock, SF Levy
Nature ecology & evolution 3 (2), 293-301, 2019
Mandates: US National Science Foundation, US Department of Energy, US National …
A method for high‐throughput production of sequence‐verified DNA libraries and strain collections
JD Smith, U Schlecht, W Xu, S Suresh, J Horecka, MJ Proctor, RS Aiyar, ...
Molecular systems biology 13 (2), 913, 2017
Mandates: US National Institutes of Health
The genotype‐phenotype landscape of an allosteric protein
DS Tack, PD Tonner, A Pressman, ND Olson, SF Levy, EF Romantseva, ...
Molecular systems biology 17 (3), e10179, 2021
Mandates: US Department of Energy
Polygenic cis-regulatory adaptation in the evolution of yeast pathogenicity
HB Fraser, S Levy, A Chavan, HB Shah, JC Perez, Y Zhou, ML Siegal, ...
Genome research 22 (10), 1930-1939, 2012
Mandates: US National Institutes of Health
FTDP-17 mutations in Tau alter the regulation of microtubule dynamics
AC LeBoeuf, SF Levy, M Gaylord, A Bhattacharya, AK Singh, MA Jordan, ...
Journal of Biological Chemistry 283 (52), 36406-36415, 2008
Mandates: US National Institutes of Health, Howard Hughes Medical Institute
Histone variant HTZ1 shows extensive epistasis with, but does not increase robustness to, new mutations
JB Richardson, LD Uppendahl, MK Traficante, SF Levy, ML Siegal
PLoS genetics 9 (8), e1003733, 2013
Mandates: US National Institutes of Health
A scalable double-barcode sequencing platform for characterization of dynamic protein-protein interactions
U Schlecht, Z Liu, JR Blundell, RP St. Onge, SF Levy
Nature communications 8 (1), 15586, 2017
Mandates: US National Institutes of Health
iSeq: a new double-barcode method for detecting dynamic genetic interactions in yeast
M Jaffe, G Sherlock, SF Levy
G3: Genes, Genomes, Genetics 7 (1), 143-153, 2017
Mandates: US National Science Foundation, US National Institutes of Health
Improved discovery of genetic interactions using CRISPRiSeq across multiple environments
M Jaffe, A Dziulko, JD Smith, RPS Onge, SF Levy, G Sherlock
Genome research 29 (4), 668-681, 2019
Mandates: US National Science Foundation, US Department of Energy, US National …
A large accessory protein interactome is rewired across environments
Z Liu, D Miller, F Li, X Liu, SF Levy
Elife 9, e62365, 2020
Mandates: US Department of Energy, US National Institutes of Health
Unbiased fitness estimation of pooled barcode or amplicon sequencing studies
F Li, ML Salit, SF Levy
Cell systems 7 (5), 521-525. e4, 2018
Mandates: US National Institutes of Health
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