Articles with public access mandates - Laura CantiniLearn more
Not available anywhere: 1
Application of independent component analysis to tumor transcriptomes reveals specific and reproducible immune-related signals
U Czerwinska, L Cantini, U Kairov, E Barillot, A Zinovyev
International Conference on Latent Variable Analysis and Signal Separation …, 2018
Mandates: National Institute of Health and Medical Research, France
Available somewhere: 23
Benchmarking joint multi-omics dimensionality reduction approaches for the study of cancer
L Cantini, P Zakeri, C Hernandez, A Naldi, D Thieffry, E Remy, A Baudot
Nature communications 12 (1), 124, 2021
Mandates: Agence Nationale de la Recherche
Detection of gene communities in multi-networks reveals cancer drivers
L Cantini, E Medico, S Fortunato, M Caselle
Scientific reports 5 (1), 17386, 2015
Mandates: Government of Italy
Independent component analysis for unraveling the complexity of cancer omics datasets
N Sompairac, PV Nazarov, U Czerwinska, L Cantini, A Biton, A Molkenov, ...
International Journal of molecular sciences 20 (18), 4414, 2019
Mandates: European Commission, Luxembourg National Research Fund
Interpreting pathways to discover cancer driver genes with Moonlight
A Colaprico, C Olsen, MH Bailey, GJ Odom, T Terkelsen, TC Silva, ...
Nature communications 11 (1), 69, 2020
Mandates: US National Institutes of Health, National Fund for Scientific Research …
MicroRNA–mRNA interactions underlying colorectal cancer molecular subtypes
L Cantini, C Isella, C Petti, G Picco, S Chiola, E Ficarra, M Caselle, ...
Nature communications 6 (1), 8878, 2015
Mandates: Government of Italy
Identification of microRNA clusters cooperatively acting on epithelial to mesenchymal transition in triple negative breast cancer
L Cantini, G Bertoli, C Cava, T Dubois, A Zinovyev, M Caselle, ...
Nucleic acids research 47 (5), 2205-2215, 2019
Mandates: Government of Italy
Determining the optimal number of independent components for reproducible transcriptomic data analysis
U Kairov, L Cantini, A Greco, A Molkenov, U Czerwinska, E Barillot, ...
BMC genomics 18, 1-13, 2017
Mandates: National Institute of Health and Medical Research, France
Evaluating the reproducibility of single-cell gene regulatory network inference algorithms
Y Kang, D Thieffry, L Cantini
Frontiers in genetics 12, 617282, 2021
Mandates: Agence Nationale de la Recherche
Optimal transport improves cell–cell similarity inference in single-cell omics data
GJ Huizing, G Peyré, L Cantini
Bioinformatics 38 (8), 2169-2177, 2022
Mandates: European Commission, Agence Nationale de la Recherche
Assessing reproducibility of matrix factorization methods in independent transcriptomes
L Cantini, U Kairov, A De Reyniès, E Barillot, F Radvanyi, A Zinovyev
Bioinformatics 35 (21), 4307-4313, 2019
Mandates: European Commission
Hope4Genes: a Hopfield-like class prediction algorithm for transcriptomic data
L Cantini, M Caselle
Scientific reports 9 (1), 337, 2019
Mandates: Government of Italy
Molecular inverse comorbidity between Alzheimer’s disease and lung cancer: New insights from matrix factorization
A Greco, J Sanchez Valle, V Pancaldi, A Baudot, E Barillot, M Caselle, ...
International Journal of Molecular Sciences 20 (13), 3114, 2019
Mandates: Government of Spain, Government of Italy
Investigating the epi-miRNome: Identification of epi-miRNAs using transfection experiments
E Reale, D Taverna, L Cantini, L Martignetti, M Osella, C De Pittà, F Virga, ...
Epigenomics 11 (14), 1581-1599, 2019
Mandates: Government of Italy, AIRC Foundation for Cancer Research in Italy
Paired single-cell multi-omics data integration with Mowgli
GJ Huizing, IM Deutschmann, G Peyré, L Cantini
Nature Communications 14 (1), 7711, 2023
Mandates: European Commission, Agence Nationale de la Recherche
Microglia maintain structural integrity during fetal brain morphogenesis
AR Lawrence, A Canzi, C Bridlance, N Olivié, C Lansonneur, C Catale, ...
Cell 187 (4), 962-980. e19, 2024
Mandates: National Institute of Health and Medical Research, France, UK Medical …
Unsupervised ground metric learning using wasserstein singular vectors
GJ Huizing, L Cantini, G Peyré
International Conference on Machine Learning, 9429-9443, 2022
Mandates: European Commission, Agence Nationale de la Recherche
Molecular mechanisms reconstruction from single-cell multi-omics data with HuMMuS
R Trimbour, IM Deutschmann, L Cantini
Bioinformatics 40 (5), btae143, 2024
Mandates: Agence Nationale de la Recherche
Collective intelligence defines biological functions in Wikipedia as communities in the hidden protein connection network
A Zinovyev, U Czerwinska, L Cantini, E Barillot, KM Frahm, ...
PLOS Computational Biology 16 (2), e1007652, 2020
Mandates: Agence Nationale de la Recherche
MMRA MicroRNA master regulator analysis
L Cantini, C Isella, C Petti, G Picco, S Chiola, E Ficarra, M Caselle, ...
Mandates: Government of Italy
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