Invited review: Reliability of genomic predictions for North American Holstein bulls PM VanRaden, CP Van Tassell, GR Wiggans, TS Sonstegard, ... Journal of dairy science 92 (1), 16-24, 2009 | 1606 | 2009 |
Development and characterization of a high density SNP genotyping assay for cattle LK Matukumalli, CT Lawley, RD Schnabel, JF Taylor, MF Allan, ... PloS one 4 (4), e5350, 2009 | 1169 | 2009 |
The genome sequence of taurine cattle: a window to ruminant biology and evolution Bovine Genome Sequencing and Analysis Consortium, CG Elsik, ... Science 324 (5926), 522-528, 2009 | 1153 | 2009 |
Genome-wide survey of SNP variation uncovers the genetic structure of cattle breeds Bovine HapMap Consortium, RA Gibbs, JF Taylor, CP Van Tassell, ... Science 324 (5926), 528-532, 2009 | 1001 | 2009 |
SNP discovery and allele frequency estimation by deep sequencing of reduced representation libraries CP Van Tassell, TPL Smith, LK Matukumalli, JF Taylor, RD Schnabel, ... Nature methods 5 (3), 247-252, 2008 | 774 | 2008 |
Design of a high density SNP genotyping assay in the pig using SNPs identified and characterized by next generation sequencing technology AM Ramos, RPMA Crooijmans, NA Affara, AJ Amaral, AL Archibald, ... PloS one 4 (8), e6524, 2009 | 772 | 2009 |
Worldwide patterns of ancestry, divergence, and admixture in domesticated cattle JE Decker, SD McKay, MM Rolf, JW Kim, A Molina Alcalá, TS Sonstegard, ... PLoS genetics 10 (3), e1004254, 2014 | 491 | 2014 |
De novo assembly of the cattle reference genome with single-molecule sequencing BD Rosen, DM Bickhart, RD Schnabel, S Koren, CG Elsik, E Tseng, ... Gigascience 9 (3), giaa021, 2020 | 471 | 2020 |
Copy number variation of individual cattle genomes using next-generation sequencing DM Bickhart, Y Hou, SG Schroeder, C Alkan, MF Cardone, ... Genome research 22 (4), 778-790, 2012 | 349 | 2012 |
Bottlenecks and selective sweeps during domestication have increased deleterious genetic variation in dogs CD Marsden, D Ortega-Del Vecchyo, DP O’Brien, JF Taylor, O Ramirez, ... Proceedings of the National Academy of Sciences 113 (1), 152-157, 2016 | 336 | 2016 |
Distribution and location of genetic effects for dairy traits JB Cole, PM VanRaden, JR O’Connell, CP Van Tassell, TS Sonstegard, ... Journal of dairy science 92 (6), 2931-2946, 2009 | 315 | 2009 |
Meta-analysis of genome-wide association studies for cattle stature identifies common genes that regulate body size in mammals AC Bouwman, HD Daetwyler, AJ Chamberlain, CH Ponce, M Sargolzaei, ... Nature genetics 50 (3), 362-367, 2018 | 304 | 2018 |
The genome sequence of taurine cattle: a window to ruminant biology and evolution TBG Sequencing, CG Elsik, RL Tellam, KC Worley, Analysis Consortium Science (New York, NY) 324 (5926), 522, 2009 | 297 | 2009 |
Whole genome linkage disequilibrium maps in cattle SD McKay, RD Schnabel, BM Murdoch, LK Matukumalli, J Aerts, ... BMC genetics 8, 1-12, 2007 | 294 | 2007 |
Resolving the evolution of extant and extinct ruminants with high-throughput phylogenomics JE Decker, JC Pires, GC Conant, SD McKay, MP Heaton, K Chen, ... Proceedings of the National Academy of Sciences 106 (44), 18644-18649, 2009 | 287 | 2009 |
A genome scan for quantitative trait loci influencing carcass, post‐natal growth and reproductive traits in commercial Angus cattle MC McClure, NS Morsci, RD Schnabel, JW Kim, P Yao, MM Rolf, ... Animal genetics 41 (6), 597-607, 2010 | 275 | 2010 |
Accuracies of genomic breeding values in American Angus beef cattle using K-means clustering for cross-validation M Saatchi, MC McClure, SD McKay, MM Rolf, JW Kim, JE Decker, ... Genetics Selection Evolution 43, 1-16, 2011 | 274 | 2011 |
Extent of genome-wide linkage disequilibrium in Australian Holstein-Friesian cattle based on a high-density SNP panel MS Khatkar, FW Nicholas, AR Collins, KR Zenger, JAL Cavanagh, ... BMC genomics 9, 1-18, 2008 | 263 | 2008 |
New World cattle show ancestry from multiple independent domestication events EJ McTavish, JE Decker, RD Schnabel, JF Taylor, DM Hillis Proceedings of the National Academy of Sciences 110 (15), E1398-E1406, 2013 | 236 | 2013 |
Large-effect pleiotropic or closely linked QTL segregate within and across ten US cattle breeds M Saatchi, RD Schnabel, JF Taylor, DJ Garrick BMC genomics 15, 1-17, 2014 | 232 | 2014 |