Articles with public access mandates - Noah DuklerLearn more
Available somewhere: 10
Conserved pleiotropy of an ancient plant homeobox gene uncovered by cis-regulatory dissection
A Hendelman, S Zebell, D Rodriguez-Leal, N Dukler, G Robitaille, X Wu, ...
Cell 184 (7), 1724-1739. e16, 2021
Mandates: US National Science Foundation, US Department of Agriculture, Howard Hughes …
A community-maintained standard library of population genetic models
JR Adrion, CB Cole, N Dukler, JG Galloway, AL Gladstein, G Gower, ...
elife 9, e54967, 2020
Mandates: US National Institutes of Health, Villum Foundation
Is a super-enhancer greater than the sum of its parts?
N Dukler, B Gulko, YF Huang, A Siepel
Nature genetics 49 (1), 2-3, 2017
Mandates: US National Institutes of Health
Dynamic evolution of regulatory element ensembles in primate CD4+ T cells
CG Danko, LA Choate, BA Marks, EJ Rice, Z Wang, T Chu, AL Martins, ...
Nature Ecology & Evolution 2 (3), 537-548, 2018
Mandates: US National Institutes of Health
Characterizing RNA stability genome-wide through combined analysis of PRO-seq and RNA-seq data
A Blumberg, Y Zhao, YF Huang, N Dukler, EJ Rice, AG Chivu, K Krumholz, ...
BMC biology 19, 1-17, 2021
Mandates: US National Institutes of Health
Nascent RNA sequencing reveals a dynamic global transcriptional response at genes and enhancers to the natural medicinal compound celastrol
N Dukler, GT Booth, YF Huang, N Tippens, CT Waters, CG Danko, JT Lis, ...
Genome research 27 (11), 1816-1829, 2017
Mandates: US National Institutes of Health
From summary statistics to gene trees: methods for inferring positive selection
HA Hejase, N Dukler, A Siepel
Trends in Genetics 36 (4), 243-258, 2020
Mandates: US National Institutes of Health
Extreme purifying selection against point mutations in the human genome
N Dukler, MR Mughal, R Ramani, YF Huang, A Siepel
Nature Communications 13 (1), 4312, 2022
Mandates: US National Institutes of Health
Phylogenetic modeling of regulatory element turnover based on epigenomic data
N Dukler, YF Huang, A Siepel
Molecular biology and evolution 37 (7), 2137-2152, 2020
Mandates: US National Institutes of Health
Deconvolution of expression for nascent RNA-sequencing data (DENR) highlights pre-RNA isoform diversity in human cells
Y Zhao, N Dukler, G Barshad, S Toneyan, CG Danko, A Siepel
Bioinformatics 37 (24), 4727-4736, 2021
Mandates: US National Institutes of Health
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