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Yutao Fu
Yutao Fu
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Cited by
Year
Identification and analysis of functional elements in 1% of the human genome by the ENCODE pilot project
Management Group Liefer Laura A. 51 Wetterstrand Kris A. 51 Good Peter J. 51 ...
nature 447 (7146), 799-816, 2007
59872007
Distinct and predictive chromatin signatures of transcriptional promoters and enhancers in the human genome
ND Heintzman, RK Stuart, G Hon, Y Fu, CW Ching, RD Hawkins, ...
Nature genetics 39 (3), 311-318, 2007
39782007
An integrated semiconductor device enabling non-optical genome sequencing
JM Rothberg, W Hinz, TM Rearick, J Schultz, W Mileski, M Davey, ...
Nature 475 (7356), 348-352, 2011
29702011
The ENCODE (ENCyclopedia of DNA elements) project
EA Feingold, PJ Good, MS Guyer, S Kamholz, L Liefer, K Wetterstrand, ...
Science 306 (5696), 636-640, 2004
24152004
Assessing computational tools for the discovery of transcription factor binding sites
M Tompa, N Li, TL Bailey, GM Church, B De Moor, E Eskin, AV Favorov, ...
Nature biotechnology 23 (1), 137-144, 2005
16142005
A global map of p53 transcription-factor binding sites in the human genome
CL Wei, Q Wu, VB Vega, KP Chiu, P Ng, T Zhang, A Shahab, HC Yong, ...
Cell 124 (1), 207-219, 2006
14552006
Mapping copy number variation by population-scale genome sequencing
RE Mills, K Walter, C Stewart, RE Handsaker, K Chen, C Alkan, A Abyzov, ...
Nature 470 (7332), 59-65, 2011
12952011
Sequence and structural variation in a human genome uncovered by short-read, massively parallel ligation sequencing using two-base encoding
KJ McKernan, HE Peckham, GL Costa, SF McLaughlin, Y Fu, EF Tsung, ...
Genome research 19 (9), 1527-1541, 2009
8112009
Demographic history and rare allele sharing among human populations
S Gravel, BM Henn, RN Gutenkunst, AR Indap, GT Marth, AG Clark, F Yu, ...
Proceedings of the National Academy of Sciences 108 (29), 11983-11988, 2011
7192011
Extensive sequencing of seven human genomes to characterize benchmark reference materials
JM Zook, D Catoe, J McDaniel, L Vang, N Spies, A Sidow, Z Weng, Y Liu, ...
Scientific data 3 (1), 1-26, 2016
7052016
Global mapping of c-Myc binding sites and target gene networks in human B cells
KI Zeller, XD Zhao, CWH Lee, KP Chiu, F Yao, JT Yustein, HS Ooi, ...
Proceedings of the National Academy of Sciences 103 (47), 17834-17839, 2006
6432006
Detection of functional DNA motifs via statistical over‐representation
MC Frith, Y Fu, L Yu, JF Chen, U Hansen, Z Weng
Nucleic acids research 32 (4), 1372-1381, 2004
5142004
The insulator binding protein CTCF positions 20 nucleosomes around its binding sites across the human genome
Y Fu, M Sinha, CL Peterson, Z Weng
PLoS genetics 4 (7), e1000138, 2008
4272008
Nucleosome positioning signals in genomic DNA
HE Peckham, RE Thurman, Y Fu, JA Stamatoyannopoulos, WS Noble, ...
Genome research 17 (8), 1170-1177, 2007
4142007
Identification and characterization of cell type–specific and ubiquitous chromatin regulatory structures in the human genome
H Xi, HP Shulha, JM Lin, TR Vales, Y Fu, DM Bodine, RDG McKay, ...
PLoS genetics 3 (8), e136, 2007
2782007
Chromatin and sequence features that define the fine and gross structure of genomic methylation patterns
JR Edwards, AH O'Donnell, RA Rollins, HE Peckham, C Lee, MH Milekic, ...
Genome research 20 (7), 972-980, 2010
2302010
Transcription factor binding and modified histones in human bidirectional promoters
JM Lin, PJ Collins, ND Trinklein, Y Fu, H Xi, RM Myers, Z Weng
Genome research 17 (6), 818-827, 2007
1682007
Systematic evaluation of variability in ChIP-chip experiments using predefined DNA targets
DS Johnson, W Li, DB Gordon, A Bhattacharjee, B Curry, J Ghosh, ...
Genome research 18 (3), 393-403, 2008
1602008
Analysis of overrepresented motifs in human core promoters reveals dual regulatory roles of YY1
H Xi, Y Yu, Y Fu, J Foley, A Halees, Z Weng
Genome research 17 (6), 798-806, 2007
1552007
Statistical analysis of the genomic distribution and correlation of regulatory elements in the ENCODE regions
ZD Zhang, A Paccanaro, Y Fu, S Weissman, Z Weng, J Chang, M Snyder, ...
Genome research 17 (6), 787-797, 2007
972007
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