starBase v2. 0: decoding miRNA-ceRNA, miRNA-ncRNA and protein–RNA interaction networks from large-scale CLIP-Seq data JH Li, S Liu, H Zhou, LH Qu, JH Yang Nucleic acids research 42 (D1), D92-D97, 2014 | 4624 | 2014 |
Recognition of RNA N6-methyladenosine by IGF2BP proteins enhances mRNA stability and translation H Huang, H Weng, W Sun, X Qin, H Shi, H Wu, BS Zhao, A Mesquita, ... Nature cell biology 20 (3), 285-295, 2018 | 2099 | 2018 |
METTL14 inhibits hematopoietic stem/progenitor differentiation and promotes leukemogenesis via mRNA m6A modification H Weng, H Huang, H Wu, X Qin, BS Zhao, L Dong, H Shi, J Skibbe, ... Cell stem cell 22 (2), 191-205. e9, 2018 | 855 | 2018 |
starBase: a database for exploring microRNA–mRNA interaction maps from Argonaute CLIP-Seq and Degradome-Seq data JH Yang, JH Li, P Shao, H Zhou, YQ Chen, LH Qu Nucleic acids research 39 (suppl_1), D202-D209, 2011 | 839 | 2011 |
Histone H3 trimethylation at lysine 36 guides m6A RNA modification co-transcriptionally H Huang, H Weng, K Zhou, T Wu, BS Zhao, M Sun, Z Chen, X Deng, ... Nature 567 (7748), 414-419, 2019 | 540 | 2019 |
Pachytene piRNAs instruct massive mRNA elimination during late spermiogenesis LT Gou, P Dai, JH Yang, Y Xue, YP Hu, Y Zhou, JY Kang, X Wang, H Li, ... Cell research 24 (6), 680-700, 2014 | 454 | 2014 |
ChIPBase: a database for decoding the transcriptional regulation of long non-coding RNA and microRNA genes from ChIP-Seq data JH Yang, JH Li, S Jiang, H Zhou, LH Qu Nucleic acids research 41 (D1), D177-D187, 2013 | 358 | 2013 |
RMBase v2. 0: deciphering the map of RNA modifications from epitranscriptome sequencing data JJ Xuan, WJ Sun, PH Lin, KR Zhou, S Liu, LL Zheng, LH Qu, JH Yang Nucleic acids research 46 (D1), D327-D334, 2018 | 356 | 2018 |
ChIPBase v2. 0: decoding transcriptional regulatory networks of non-coding RNAs and protein-coding genes from ChIP-seq data KR Zhou, S Liu, WJ Sun, LL Zheng, H Zhou, JH Yang, LH Qu Nucleic acids research, gkw965, 2016 | 265 | 2016 |
deepBase v2. 0: identification, expression, evolution and function of small RNAs, LncRNAs and circular RNAs from deep-sequencing data LL Zheng, JH Li, J Wu, WJ Sun, S Liu, ZL Wang, H Zhou, JH Yang, LH Qu Nucleic acids research 44 (D1), D196-D202, 2016 | 213 | 2016 |
Capturing the interactome of newly transcribed RNA X Bao, X Guo, M Yin, M Tariq, Y Lai, S Kanwal, J Zhou, N Li, Y Lv, ... Nature methods 15 (3), 213-220, 2018 | 196 | 2018 |
Rice embryogenic calli express a unique set of microRNAs, suggesting regulatory roles of microRNAs in plant post-embryogenic development YC Luo, H Zhou, Y Li, JY Chen, JH Yang, YQ Chen, LH Qu Febs Letters 580 (21), 5111-5116, 2006 | 190 | 2006 |
RMBase: a resource for decoding the landscape of RNA modifications from high-throughput sequencing data WJ Sun, JH Li, S Liu, J Wu, H Zhou, LH Qu, JH Yang Nucleic acids research 44 (D1), D259-D265, 2016 | 188 | 2016 |
Comprehensive genomic characterization of RNA-binding proteins across human cancers ZL Wang, B Li, YX Luo, Q Lin, SR Liu, XQ Zhang, H Zhou, JH Yang, ... Cell reports 22 (1), 286-298, 2018 | 186 | 2018 |
deepBase: a database for deeply annotating and mining deep sequencing data JH Yang, P Shao, H Zhou, YQ Chen, LH Qu Nucleic acids research 38 (suppl_1), D123-D130, 2010 | 171 | 2010 |
snoSeeker: an advanced computational package for screening of guide and orphan snoRNA genes in the human genome JH Yang, XC Zhang, ZP Huang, H Zhou, MB Huang, S Zhang, YQ Chen, ... Nucleic acids research 34 (18), 5112-5123, 2006 | 155 | 2006 |
Prognostic value of a long non-coding RNA signature in localized clear cell renal cell carcinoma LE Qu, Z Wang, Q Chen, Y Li, H He, JJ Hsieh, S Xue, Z Wu, B Liu, H Tang, ... European urology 74 (6), 756-763, 2018 | 130 | 2018 |
tRF2Cancer: a web server to detect tRNA-derived small RNA fragments (tRFs) and their expression in multiple cancers LL Zheng, WL Xu, S Liu, WJ Sun, JH Li, J Wu, JH Yang, LH Qu Nucleic acids research 44 (W1), W185-W193, 2016 | 129 | 2016 |
Interplay of m6A and H3K27 trimethylation restrains inflammation during bacterial infection C Wu, W Chen, J He, S Jin, Y Liu, Y Yi, Z Gao, J Yang, J Yang, J Cui, ... Science advances 6 (34), eaba0647, 2020 | 110 | 2020 |
Inhibition of the JNK/MAPK signaling pathway by myogenesis-associated miRNAs is required for skeletal muscle development SJ Xie, JH Li, HF Chen, YY Tan, SR Liu, Y Zhang, H Xu, JH Yang, S Liu, ... Cell Death & Differentiation 25 (9), 1581-1597, 2018 | 103 | 2018 |