Articles with public access mandates - Laleh HaghverdiLearn more
Available somewhere: 15
Batch effects in single-cell RNA-sequencing data are corrected by matching mutual nearest neighbors
L Haghverdi, ATL Lun, MD Morgan, JC Marioni
Nature biotechnology 36 (5), 421-427, 2018
Mandates: Cancer Research UK, Wellcome Trust
Diffusion pseudotime robustly reconstructs lineage branching
FBFJT Laleh Haghverdi, Maren Büttner, F Alexander Wolf
Nature Methods 13, 845–848, 2016
Mandates: German Research Foundation, Helmholtz Association, UK Medical Research Council
Diffusion maps for high-dimensional single-cell analysis of differentiation data
L Haghverdi, F Buettner, FJ Theis
Bioinformatics 31 (18), 2989-2998, 2015
Mandates: European Commission
destiny: diffusion maps for large-scale single-cell data in R
P Angerer, L Haghverdi, M Büttner, FJ Theis, C Marr, F Buettner
Bioinformatics 32 (8), 1241-1243, 2016
Mandates: German Research Foundation, UK Medical Research Council, European Commission
Decoding the regulatory network of early blood development from single-cell gene expression measurements
V Moignard, S Woodhouse, L Haghverdi, AJ Lilly, Y Tanaka, ...
Nature biotechnology 33 (3), 269-276, 2015
Mandates: UK Biotechnology and Biological Sciences Research Council, Cancer Research …
Reconstructing gene regulatory dynamics from high-dimensional single-cell snapshot data
A Ocone, L Haghverdi, NS Mueller, FJ Theis
Bioinformatics 31 (12), i89-i96, 2015
Mandates: European Commission
Single-cell transcriptomics reveals common epithelial response patterns in human acute kidney injury
C Hinze, C Kocks, J Leiz, N Karaiskos, A Boltengagen, S Cao, ...
Genome Medicine 14 (1), 103, 2022
Mandates: German Research Foundation, Federal Ministry of Education and Research, Germany
Sparse stabilization of dynamical systems driven by attraction and avoidance forces
M Bongini, M Fornasier
Networks and Heterogeneous Media 9 (1), 1-31, 2014
Mandates: European Commission
Single-cell multi-omics and lineage tracing to dissect cell fate decision-making
L Haghverdi, LS Ludwig
Stem Cell Reports 18 (1), 13-25, 2023
Mandates: US National Institutes of Health, German Research Foundation, Federal …
Towards reliable quantification of cell state velocities
V Marot-Lassauzaie, BJ Bouman, FD Donaghy, Y Demerdash, ...
PLoS Computational Biology 18 (9), e1010031, 2022
Mandates: German Research Foundation, Federal Ministry of Education and Research, Germany
Sparse control of force field dynamics
M Bongini, M Fornasier, F Frcöhlich, L Haghverdi
2014 7th International Conference on NETwork Games, COntrol and OPtimization …, 2014
Mandates: European Commission
Adjustments to the reference dataset design improve cell type label transfer
C Mölbert, L Haghverdi
Frontiers in Bioinformatics 3, 1150099, 2023
Mandates: German Research Foundation
Single-cell time series analysis reveals the dynamics of in vivo HSPC responses to inflammation
BJ Bouman, Y Demerdash, S Sood, F Grünschläger, F Pilz, AR Itani, ...
bioRxiv, 2023.03. 09.531881, 2023
Mandates: German Research Foundation, Federal Ministry of Education and Research, Germany
Transcriptomic responses of the human kidney to acute injury at single cell resolution
C Hinze, C Kocks, J Leiz, N Karaiskos, A Boltengagen, CM Skopnik, ...
bioRxiv, 2021.12. 15.472619, 2021
Mandates: German Research Foundation, Federal Ministry of Education and Research, Germany
Decoding the regulatory network for blood development from single cell gene expression measurements
N Piterman, V Moignard, S Woodhouse, L Haghverdi, J Lilly, Y Tanaka, ...
University of Leicester, 2015
Mandates: UK Medical Research Council, Wellcome Trust
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