Articles with public access mandates - Zhipeng LuLearn more
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RNA Duplex Map in Living Cells Reveals Higher-Order Transcriptome Structure
Z Lu, QC Zhang, B Lee, RA Flynn, MA Smith, JT Robinson, C Davidovich, ...
Cell 165 (5), 1267-1279, 2016
Mandates: US National Institutes of Health
Metazoan tRNA introns generate stable circular RNAs in vivo
Z Lu, GS Filonov, JJ Noto, CA Schmidt, TL Hatkevich, Y Wen, SR Jaffrey, ...
rna 21 (9), 1554-1565, 2015
Mandates: US National Institutes of Health
Modeling microcephaly with cerebral organoids reveals a WDR62–CEP170–KIF2A pathway promoting cilium disassembly in neural progenitors
W Zhang, SL Yang, M Yang, S Herrlinger, Q Shao, JL Collar, E Fierro, ...
Nature communications 10 (1), 2612, 2019
Mandates: US National Institutes of Health
Cerebral organoid and mouse models reveal a RAB39b–PI3K–mTOR pathway-dependent dysregulation of cortical development leading to macrocephaly/autism phenotypes
W Zhang, L Ma, M Yang, Q Shao, J Xu, Z Lu, Z Zhao, R Chen, Y Chai, ...
Genes & Development 34 (7-8), 580-597, 2020
Mandates: US National Institutes of Health
RISE: a database of RNA interactome from sequencing experiments
J Gong, D Shao, K Xu, Z Lu, ZJ Lu, YT Yang, QC Zhang
Nucleic acids research 46 (D1), D194-D201, 2018
Mandates: US National Institutes of Health, National Natural Science Foundation of China
Decoding the RNA structurome
Z Lu, HY Chang
Current Opinion in Structural Biology 36, 142-148, 2016
Mandates: US National Institutes of Health
Mechanistic insights in X-chromosome inactivation
Z Lu, AC Carter, HY Chang
Philosophical Transactions of the Royal Society B: Biological Sciences 372 …, 2017
Mandates: US National Institutes of Health
Structural modularity of the XIST ribonucleoprotein complex
Z Lu, JK Guo, Y Wei, DR Dou, B Zarnegar, Q Ma, R Li, Y Zhao, F Liu, ...
Nature Communications 11 (1), 6163, 2020
Mandates: US National Institutes of Health, Howard Hughes Medical Institute
Developmental arrest of Drosophila survival motor neuron (Smn) mutants accounts for differences in expression of minor intron-containing genes
EL Garcia, Z Lu, MP Meers, K Praveen, AG Matera
RNA 19 (11), 1510-1516, 2013
Mandates: US National Institutes of Health
PARIS: Psoralen analysis of RNA interactions and structures with high throughput and resolution
Z Lu, J Gong, QC Zhang
RNA Detection: Methods and Protocols, 59-84, 2018
Mandates: US National Institutes of Health, National Natural Science Foundation of China
RIP-seq analysis of eukaryotic Sm proteins identifies three major categories of Sm-containing ribonucleoproteins
Z Lu, X Guan, CA Schmidt, AG Matera
Genome Biol 15, R7, 2014
Mandates: US National Institutes of Health
The RNA Base-Pairing Problem and Base-Pairing Solutions
Z Lu, HY Chang
Cold Spring Harbor Perspectives in Biology 10 (12), a034926, 2018
Mandates: US National Institutes of Health
Optimized photochemistry enables efficient analysis of dynamic RNA structuromes and interactomes in genetic and infectious diseases
M Zhang, K Li, J Bai, WA Velema, C Yu, R van Damme, WH Lee, ...
Nature Communications 12 (1), 2344, 2021
Mandates: US National Institutes of Health
Chemical reversible crosslinking enables measurement of RNA 3D distances and alternative conformations in cells
R Van Damme, K Li, M Zhang, J Bai, WH Lee, JD Yesselman, Z Lu, ...
Nature Communications 13 (1), 911, 2022
Mandates: US National Institutes of Health, Netherlands Organisation for Scientific …
Developmental analysis of spliceosomal snRNA isoform expression
Z Lu, AG Matera
G3: Genes, Genomes, Genetics 5 (1), 103-110, 2015
Mandates: US National Institutes of Health
Vicinal: a method for the determination of ncRNA ends using chimeric reads from RNA-seq experiments
Z Lu, AG Matera
Nucleic acids research, gku207, 2014
Mandates: US National Institutes of Health
Chemical RNA Cross-Linking: Mechanisms, Computational Analysis, and Biological Applications
WA Velema, Z Lu
JACS Au 3 (2), 316-332, 2023
Mandates: US National Institutes of Health, European Commission
Classification and clustering of RNA crosslink-ligation data reveal complex structures and homodimers
M Zhang, IT Hwang, K Li, J Bai, JF Chen, T Weissman, JY Zou, Z Lu
Genome Research 32 (5), 968-985, 2022
Mandates: US National Institutes of Health
IRIS: A method for predicting in vivo RNA secondary structures using PARIS data
J Zhou, P Li, W Zeng, W Ma, Z Lu, R Jiang, Q Cliff Zhang, T Jiang
Quantitative Biology 8 (4), 369-381, 2020
Mandates: National Natural Science Foundation of China
Chemical crosslinking and ligation methods for in vivo analysis of RNA structures and interactions.
WH Lee, K Li, Z Lu
Methods in Enzymology 691, 253-281, 2023
Mandates: US National Institutes of Health
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